Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
HIST1H3AP68431 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HIST1H3AP68431 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HIST1H3AP68431 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.84■□□□□ 0.29
HIST1H3AP68431 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
HIST1H3AP68431 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.84■□□□□ 0.29
HIST1H3AP68431 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HIST1H3AP68431 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
HIST1H3AP68431 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HIST1H3AP68431 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
HIST1H3AP68431 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HIST1H3AP68431 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.84■□□□□ 0.29
HIST1H3AP68431 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HIST1H3AP68431 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.84■□□□□ 0.29
HIST1H3AP68431 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.84■□□□□ 0.29
HIST1H3AP68431 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HIST1H3AP68431 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HIST1H3AP68431 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.84■□□□□ 0.29
HIST1H3AP68431 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HIST1H3AP68431 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.84■□□□□ 0.29
HIST1H3AP68431 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.84■□□□□ 0.29
HIST1H3AP68431 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.84■□□□□ 0.29
HIST1H3AP68431 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
HIST1H3AP68431 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.84■□□□□ 0.29
HIST1H3AP68431 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.84■□□□□ 0.29
HIST1H3AP68431 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HIST1H3AP68431 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
HIST1H3AP68431 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.84■□□□□ 0.29
HIST1H3AP68431 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HIST1H3AP68431 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.84■□□□□ 0.29
HIST1H3AP68431 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HIST1H3AP68431 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HIST1H3AP68431 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HIST1H3AP68431 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.84■□□□□ 0.29
HIST1H3AP68431 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HIST1H3AP68431 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
HIST1H3AP68431 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
HIST1H3AP68431 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HIST1H3AP68431 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.84■□□□□ 0.29
HIST1H3AP68431 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.84■□□□□ 0.29
HIST1H3AP68431 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HIST1H3AP68431 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HIST1H3AP68431 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
HIST1H3AP68431 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.83■□□□□ 0.29
HIST1H3AP68431 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HIST1H3AP68431 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HIST1H3AP68431 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HIST1H3AP68431 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HIST1H3AP68431 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HIST1H3AP68431 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HIST1H3AP68431 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
HIST1H3AP68431 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.83■□□□□ 0.28
HIST1H3AP68431 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.83■□□□□ 0.28
HIST1H3AP68431 POU5F1P3-201ENST00000428824 1078 ntBASIC16.83■□□□□ 0.28
HIST1H3AP68431 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.83■□□□□ 0.28
HIST1H3AP68431 AC128676.1-201ENST00000454392 318 ntBASIC16.83■□□□□ 0.28
HIST1H3AP68431 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.83■□□□□ 0.28
HIST1H3AP68431 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
HIST1H3AP68431 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HIST1H3AP68431 AL160286.2-201ENST00000567150 934 ntBASIC16.83■□□□□ 0.28
HIST1H3AP68431 AC110285.5-201ENST00000611501 352 ntBASIC16.83■□□□□ 0.28
HIST1H3AP68431 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.83■□□□□ 0.28
HIST1H3AP68431 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HIST1H3AP68431 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HIST1H3AP68431 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.82■□□□□ 0.28
HIST1H3AP68431 TNXA-203ENST00000507684 2038 ntBASIC16.82■□□□□ 0.28
HIST1H3AP68431 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.82■□□□□ 0.28
HIST1H3AP68431 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HIST1H3AP68431 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HIST1H3AP68431 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HIST1H3AP68431 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HIST1H3AP68431 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.82■□□□□ 0.28
HIST1H3AP68431 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.82■□□□□ 0.28
HIST1H3AP68431 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.82■□□□□ 0.28
HIST1H3AP68431 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.82■□□□□ 0.28
HIST1H3AP68431 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.82■□□□□ 0.28
HIST1H3AP68431 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.82■□□□□ 0.28
HIST1H3AP68431 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
HIST1H3AP68431 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HIST1H3AP68431 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HIST1H3AP68431 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.82■□□□□ 0.28
HIST1H3AP68431 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HIST1H3AP68431 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
HIST1H3AP68431 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HIST1H3AP68431 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HIST1H3AP68431 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HIST1H3AP68431 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HIST1H3AP68431 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HIST1H3AP68431 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.82■□□□□ 0.28
HIST1H3AP68431 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
HIST1H3AP68431 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
HIST1H3AP68431 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HIST1H3AP68431 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HIST1H3AP68431 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
HIST1H3AP68431 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
HIST1H3AP68431 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HIST1H3AP68431 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HIST1H3AP68431 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.81■□□□□ 0.28
HIST1H3AP68431 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HIST1H3AP68431 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms