Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.96■□□□□ 0.31
UBE2NP61088 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.96■□□□□ 0.31
UBE2NP61088 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
UBE2NP61088 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.96■□□□□ 0.31
UBE2NP61088 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
UBE2NP61088 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBE2NP61088 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBE2NP61088 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.96■□□□□ 0.31
UBE2NP61088 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBE2NP61088 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
UBE2NP61088 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
UBE2NP61088 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.96■□□□□ 0.3
UBE2NP61088 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2NP61088 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.95■□□□□ 0.3
UBE2NP61088 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2NP61088 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
UBE2NP61088 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
UBE2NP61088 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
UBE2NP61088 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
UBE2NP61088 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2NP61088 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2NP61088 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2NP61088 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2NP61088 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2NP61088 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2NP61088 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2NP61088 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2NP61088 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2NP61088 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.95■□□□□ 0.3
UBE2NP61088 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2NP61088 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2NP61088 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.95■□□□□ 0.3
UBE2NP61088 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.95■□□□□ 0.3
UBE2NP61088 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.95■□□□□ 0.3
UBE2NP61088 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.95■□□□□ 0.3
UBE2NP61088 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2NP61088 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.95■□□□□ 0.3
UBE2NP61088 AC026471.5-201ENST00000615068 467 ntBASIC16.95■□□□□ 0.3
UBE2NP61088 HLA-A-209ENST00000638375 975 ntBASIC16.95■□□□□ 0.3
UBE2NP61088 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2NP61088 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2NP61088 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.95■□□□□ 0.3
UBE2NP61088 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
UBE2NP61088 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.95■□□□□ 0.3
UBE2NP61088 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.95■□□□□ 0.3
UBE2NP61088 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.94■□□□□ 0.3
UBE2NP61088 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UBE2NP61088 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBE2NP61088 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBE2NP61088 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBE2NP61088 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.94■□□□□ 0.3
UBE2NP61088 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.94■□□□□ 0.3
UBE2NP61088 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
UBE2NP61088 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBE2NP61088 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
UBE2NP61088 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBE2NP61088 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBE2NP61088 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBE2NP61088 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.94■□□□□ 0.3
UBE2NP61088 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.94■□□□□ 0.3
UBE2NP61088 AL596275.1-201ENST00000423464 877 ntBASIC16.94■□□□□ 0.3
UBE2NP61088 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.94■□□□□ 0.3
UBE2NP61088 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.94■□□□□ 0.3
UBE2NP61088 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.94■□□□□ 0.3
UBE2NP61088 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.94■□□□□ 0.3
UBE2NP61088 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBE2NP61088 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBE2NP61088 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
UBE2NP61088 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBE2NP61088 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBE2NP61088 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBE2NP61088 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBE2NP61088 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.94■□□□□ 0.3
UBE2NP61088 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBE2NP61088 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.94■□□□□ 0.3
UBE2NP61088 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
UBE2NP61088 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UBE2NP61088 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UBE2NP61088 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBE2NP61088 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.93■□□□□ 0.3
UBE2NP61088 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBE2NP61088 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBE2NP61088 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.93■□□□□ 0.3
UBE2NP61088 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.93■□□□□ 0.3
UBE2NP61088 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.93■□□□□ 0.3
UBE2NP61088 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBE2NP61088 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.93■□□□□ 0.3
UBE2NP61088 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBE2NP61088 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBE2NP61088 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.93■□□□□ 0.3
UBE2NP61088 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBE2NP61088 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.93■□□□□ 0.3
UBE2NP61088 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.93■□□□□ 0.3
UBE2NP61088 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.93■□□□□ 0.3
UBE2NP61088 AL160286.2-201ENST00000567150 934 ntBASIC16.93■□□□□ 0.3
UBE2NP61088 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
UBE2NP61088 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.93■□□□□ 0.3
UBE2NP61088 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.93■□□□□ 0.3
UBE2NP61088 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UBE2NP61088 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms