Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.88■□□□□ 0.77
EIF3EP60228 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.88■□□□□ 0.77
EIF3EP60228 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
EIF3EP60228 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
EIF3EP60228 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
EIF3EP60228 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.88■□□□□ 0.77
EIF3EP60228 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
EIF3EP60228 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
EIF3EP60228 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
EIF3EP60228 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
EIF3EP60228 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
EIF3EP60228 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
EIF3EP60228 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
EIF3EP60228 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.87■□□□□ 0.77
EIF3EP60228 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.87■□□□□ 0.77
EIF3EP60228 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
EIF3EP60228 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
EIF3EP60228 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
EIF3EP60228 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
EIF3EP60228 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.87■□□□□ 0.77
EIF3EP60228 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.87■□□□□ 0.77
EIF3EP60228 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
EIF3EP60228 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
EIF3EP60228 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
EIF3EP60228 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
EIF3EP60228 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.87■□□□□ 0.77
EIF3EP60228 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
EIF3EP60228 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.87■□□□□ 0.77
EIF3EP60228 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
EIF3EP60228 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
EIF3EP60228 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
EIF3EP60228 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
EIF3EP60228 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.87■□□□□ 0.77
EIF3EP60228 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.87■□□□□ 0.77
EIF3EP60228 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.87■□□□□ 0.77
EIF3EP60228 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
EIF3EP60228 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
EIF3EP60228 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
EIF3EP60228 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
EIF3EP60228 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
EIF3EP60228 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
EIF3EP60228 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
EIF3EP60228 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
EIF3EP60228 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
EIF3EP60228 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.86■□□□□ 0.77
EIF3EP60228 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.86■□□□□ 0.77
EIF3EP60228 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
EIF3EP60228 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.86■□□□□ 0.77
EIF3EP60228 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
EIF3EP60228 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
EIF3EP60228 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
EIF3EP60228 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
EIF3EP60228 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
EIF3EP60228 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.86■□□□□ 0.77
EIF3EP60228 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
EIF3EP60228 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
EIF3EP60228 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
EIF3EP60228 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
EIF3EP60228 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
EIF3EP60228 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
EIF3EP60228 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
EIF3EP60228 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
EIF3EP60228 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
EIF3EP60228 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.85■□□□□ 0.77
EIF3EP60228 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
EIF3EP60228 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
EIF3EP60228 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
EIF3EP60228 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.85■□□□□ 0.77
EIF3EP60228 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
EIF3EP60228 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
EIF3EP60228 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
EIF3EP60228 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
EIF3EP60228 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.85■□□□□ 0.77
EIF3EP60228 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
EIF3EP60228 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.85■□□□□ 0.77
EIF3EP60228 PRKY-204ENST00000533551 1019 ntBASIC19.85■□□□□ 0.77
EIF3EP60228 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.85■□□□□ 0.77
EIF3EP60228 AC008403.3-201ENST00000598924 454 ntBASIC19.85■□□□□ 0.77
EIF3EP60228 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.85■□□□□ 0.77
EIF3EP60228 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.85■□□□□ 0.77
EIF3EP60228 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
EIF3EP60228 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
EIF3EP60228 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.85■□□□□ 0.77
EIF3EP60228 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
EIF3EP60228 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
EIF3EP60228 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.85■□□□□ 0.77
EIF3EP60228 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
EIF3EP60228 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
EIF3EP60228 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
EIF3EP60228 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
EIF3EP60228 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
EIF3EP60228 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.84■□□□□ 0.77
EIF3EP60228 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
EIF3EP60228 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.84■□□□□ 0.77
EIF3EP60228 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
EIF3EP60228 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.84■□□□□ 0.77
EIF3EP60228 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
EIF3EP60228 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.84■□□□□ 0.77
EIF3EP60228 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
EIF3EP60228 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms