Protein–RNA interactions for Protein: P58512

LINC01547, Uncharacterized protein encoded by LINC01547, humanhuman

Predicted RBP Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01547P58512 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC01547P58512 PRORSD1P-202ENST00000563365 2154 ntBASIC12.12□□□□□ -0.47
LINC01547P58512 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01547P58512 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01547P58512 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01547P58512 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01547P58512 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC01547P58512 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC12.11□□□□□ -0.47
LINC01547P58512 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01547P58512 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
LINC01547P58512 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC01547P58512 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01547P58512 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01547P58512 AC139713.2-201ENST00000641328 2723 ntBASIC12.11□□□□□ -0.47
LINC01547P58512 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01547P58512 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01547P58512 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01547P58512 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC12.11□□□□□ -0.47
LINC01547P58512 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01547P58512 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC12.11□□□□□ -0.47
LINC01547P58512 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
LINC01547P58512 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01547P58512 PGM5P4-201ENST00000421970 445 ntBASIC12.11□□□□□ -0.47
LINC01547P58512 CDV3P1-201ENST00000471403 739 ntBASIC12.11□□□□□ -0.47
LINC01547P58512 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC12.11□□□□□ -0.47
LINC01547P58512 PLD4-205ENST00000553861 667 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC01547P58512 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC01547P58512 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
LINC01547P58512 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
LINC01547P58512 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01547P58512 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01547P58512 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01547P58512 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01547P58512 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
LINC01547P58512 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
LINC01547P58512 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01547P58512 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01547P58512 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01547P58512 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01547P58512 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
LINC01547P58512 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
LINC01547P58512 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
LINC01547P58512 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC12.1□□□□□ -0.47
LINC01547P58512 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC01547P58512 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC01547P58512 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01547P58512 AP001271.2-201ENST00000624018 1556 ntBASIC12.1□□□□□ -0.47
LINC01547P58512 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
LINC01547P58512 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01547P58512 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01547P58512 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01547P58512 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
LINC01547P58512 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01547P58512 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01547P58512 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
LINC01547P58512 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC12.1□□□□□ -0.47
LINC01547P58512 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC01547P58512 VMO1-204ENST00000441199 741 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC01547P58512 AC090192.1-201ENST00000517740 490 ntBASIC12.1□□□□□ -0.47
LINC01547P58512 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC01547P58512 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC01547P58512 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC12.1□□□□□ -0.47
LINC01547P58512 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC01547P58512 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01547P58512 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC01547P58512 AC068880.1-201ENST00000507289 2297 ntBASIC12.1□□□□□ -0.47
LINC01547P58512 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
LINC01547P58512 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01547P58512 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01547P58512 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01547P58512 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
LINC01547P58512 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01547P58512 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
LINC01547P58512 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC01547P58512 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
LINC01547P58512 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
LINC01547P58512 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC01547P58512 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01547P58512 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01547P58512 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01547P58512 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01547P58512 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01547P58512 KRT8P17-201ENST00000453110 1448 ntBASIC12.1□□□□□ -0.47
LINC01547P58512 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01547P58512 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01547P58512 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
LINC01547P58512 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01547P58512 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01547P58512 NFIC-211ENST00000641145 8399 ntBASIC12.09□□□□□ -0.47
LINC01547P58512 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
LINC01547P58512 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01547P58512 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC01547P58512 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC12.09□□□□□ -0.47
LINC01547P58512 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01547P58512 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
LINC01547P58512 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01547P58512 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01547P58512 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01547P58512 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01547P58512 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms