Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH12P55289 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.94■□□□□ 0.46
CDH12P55289 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH12P55289 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH12P55289 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH12P55289 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDH12P55289 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CDH12P55289 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.94■□□□□ 0.46
CDH12P55289 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.94■□□□□ 0.46
CDH12P55289 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.94■□□□□ 0.46
CDH12P55289 GUSBP6-202ENST00000438529 1198 ntBASIC17.94■□□□□ 0.46
CDH12P55289 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDH12P55289 AC005829.2-201ENST00000571422 1056 ntBASIC17.94■□□□□ 0.46
CDH12P55289 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.94■□□□□ 0.46
CDH12P55289 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.94■□□□□ 0.46
CDH12P55289 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH12P55289 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH12P55289 AC007613.1-201ENST00000572811 2597 ntBASIC17.94■□□□□ 0.46
CDH12P55289 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDH12P55289 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH12P55289 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.94■□□□□ 0.46
CDH12P55289 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CDH12P55289 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH12P55289 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH12P55289 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
CDH12P55289 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH12P55289 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH12P55289 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH12P55289 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CDH12P55289 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH12P55289 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH12P55289 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CDH12P55289 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH12P55289 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH12P55289 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.93■□□□□ 0.46
CDH12P55289 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH12P55289 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CDH12P55289 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH12P55289 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH12P55289 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.93■□□□□ 0.46
CDH12P55289 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.93■□□□□ 0.46
CDH12P55289 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CDH12P55289 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CDH12P55289 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH12P55289 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.93■□□□□ 0.46
CDH12P55289 SLC29A4P1-201ENST00000398760 971 ntBASIC17.93■□□□□ 0.46
CDH12P55289 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.93■□□□□ 0.46
CDH12P55289 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.93■□□□□ 0.46
CDH12P55289 NCF1B-203ENST00000435988 1254 ntBASIC17.93■□□□□ 0.46
CDH12P55289 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.93■□□□□ 0.46
CDH12P55289 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.93■□□□□ 0.46
CDH12P55289 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.93■□□□□ 0.46
CDH12P55289 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH12P55289 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH12P55289 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH12P55289 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.93■□□□□ 0.46
CDH12P55289 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH12P55289 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CDH12P55289 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH12P55289 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.93■□□□□ 0.46
CDH12P55289 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH12P55289 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH12P55289 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH12P55289 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH12P55289 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH12P55289 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH12P55289 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH12P55289 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.93■□□□□ 0.46
CDH12P55289 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH12P55289 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.92■□□□□ 0.46
CDH12P55289 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH12P55289 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDH12P55289 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH12P55289 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH12P55289 AC104581.1-202ENST00000635932 2618 ntBASIC17.92■□□□□ 0.46
CDH12P55289 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH12P55289 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH12P55289 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH12P55289 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CDH12P55289 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
CDH12P55289 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDH12P55289 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH12P55289 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH12P55289 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH12P55289 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.92■□□□□ 0.46
CDH12P55289 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH12P55289 AC073210.2-201ENST00000430369 194 ntBASIC17.92■□□□□ 0.46
CDH12P55289 TSPY6P-201ENST00000448518 926 ntBASIC17.92■□□□□ 0.46
CDH12P55289 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH12P55289 AC091874.3-201ENST00000512672 1195 ntBASIC17.92■□□□□ 0.46
CDH12P55289 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH12P55289 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.92■□□□□ 0.46
CDH12P55289 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH12P55289 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH12P55289 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CDH12P55289 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH12P55289 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CDH12P55289 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CDH12P55289 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.92■□□□□ 0.46
CDH12P55289 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms