Protein–RNA interactions for Protein: P51801

CLCNKB, Chloride channel protein ClC-Kb, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKBP51801 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCNKBP51801 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.6■□□□□ 0.89
CLCNKBP51801 KRT18P35-201ENST00000510488 1269 ntBASIC20.6■□□□□ 0.89
CLCNKBP51801 AL353719.1-201ENST00000566847 864 ntBASIC20.6■□□□□ 0.89
CLCNKBP51801 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.6■□□□□ 0.89
CLCNKBP51801 AC006011.2-201ENST00000621313 1158 ntBASIC20.6■□□□□ 0.89
CLCNKBP51801 AC010653.2-201ENST00000623505 997 ntBASIC20.6■□□□□ 0.89
CLCNKBP51801 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CLCNKBP51801 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCNKBP51801 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.6■□□□□ 0.89
CLCNKBP51801 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CLCNKBP51801 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCNKBP51801 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CLCNKBP51801 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCNKBP51801 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCNKBP51801 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.59■□□□□ 0.89
CLCNKBP51801 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLCNKBP51801 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CLCNKBP51801 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLCNKBP51801 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.59■□□□□ 0.89
CLCNKBP51801 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
CLCNKBP51801 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLCNKBP51801 AC125437.2-201ENST00000625180 2167 ntBASIC20.59■□□□□ 0.89
CLCNKBP51801 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLCNKBP51801 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLCNKBP51801 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLCNKBP51801 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.59■□□□□ 0.89
CLCNKBP51801 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
CLCNKBP51801 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.59■□□□□ 0.89
CLCNKBP51801 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
CLCNKBP51801 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
CLCNKBP51801 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLCNKBP51801 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLCNKBP51801 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLCNKBP51801 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CLCNKBP51801 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLCNKBP51801 CA15P1-201ENST00000481698 905 ntBASIC20.59■□□□□ 0.89
CLCNKBP51801 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.59■□□□□ 0.89
CLCNKBP51801 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.58■□□□□ 0.89
CLCNKBP51801 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLCNKBP51801 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CLCNKBP51801 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.58■□□□□ 0.89
CLCNKBP51801 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLCNKBP51801 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CLCNKBP51801 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CLCNKBP51801 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLCNKBP51801 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.58■□□□□ 0.89
CLCNKBP51801 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLCNKBP51801 DUX4L26-201ENST00000489078 1255 ntBASIC20.58■□□□□ 0.89
CLCNKBP51801 PRSS44-201ENST00000515154 1146 ntBASIC20.58■□□□□ 0.89
CLCNKBP51801 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.58■□□□□ 0.89
CLCNKBP51801 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.58■□□□□ 0.89
CLCNKBP51801 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.89
CLCNKBP51801 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.58■□□□□ 0.89
CLCNKBP51801 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLCNKBP51801 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLCNKBP51801 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLCNKBP51801 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CLCNKBP51801 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.58■□□□□ 0.88
CLCNKBP51801 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.57■□□□□ 0.88
CLCNKBP51801 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLCNKBP51801 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLCNKBP51801 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.57■□□□□ 0.88
CLCNKBP51801 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.57■□□□□ 0.88
CLCNKBP51801 SLC25A24-204ENST00000569674 2357 ntBASIC20.57■□□□□ 0.88
CLCNKBP51801 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLCNKBP51801 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLCNKBP51801 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLCNKBP51801 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLCNKBP51801 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.57■□□□□ 0.88
CLCNKBP51801 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CLCNKBP51801 AL590326.2-201ENST00000625139 305 ntBASIC20.57■□□□□ 0.88
CLCNKBP51801 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLCNKBP51801 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLCNKBP51801 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.57■□□□□ 0.88
CLCNKBP51801 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLCNKBP51801 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLCNKBP51801 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.57■□□□□ 0.88
CLCNKBP51801 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.57■□□□□ 0.88
CLCNKBP51801 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLCNKBP51801 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLCNKBP51801 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLCNKBP51801 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLCNKBP51801 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.56■□□□□ 0.88
CLCNKBP51801 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLCNKBP51801 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLCNKBP51801 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLCNKBP51801 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CLCNKBP51801 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.56■□□□□ 0.88
CLCNKBP51801 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.56■□□□□ 0.88
CLCNKBP51801 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.56■□□□□ 0.88
CLCNKBP51801 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLCNKBP51801 AL138966.2-201ENST00000621997 464 ntBASIC20.56■□□□□ 0.88
CLCNKBP51801 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLCNKBP51801 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLCNKBP51801 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLCNKBP51801 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLCNKBP51801 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLCNKBP51801 TREX1-205ENST00000625293 1783 ntBASIC20.56■□□□□ 0.88
CLCNKBP51801 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms