Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
CPT1AP50416 BET1L-202ENST00000332865 533 ntTSL 5 BASIC21.37■■□□□ 1.01
CPT1AP50416 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CPT1AP50416 STARP1-201ENST00000397973 869 ntBASIC21.37■■□□□ 1.01
CPT1AP50416 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.37■■□□□ 1.01
CPT1AP50416 AC112907.2-201ENST00000448639 330 ntBASIC21.37■■□□□ 1.01
CPT1AP50416 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC21.37■■□□□ 1.01
CPT1AP50416 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.37■■□□□ 1.01
CPT1AP50416 AL136038.3-201ENST00000561909 1096 ntBASIC21.37■■□□□ 1.01
CPT1AP50416 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CPT1AP50416 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CPT1AP50416 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.37■■□□□ 1.01
CPT1AP50416 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPT1AP50416 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.36■■□□□ 1.01
CPT1AP50416 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPT1AP50416 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CPT1AP50416 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.36■■□□□ 1.01
CPT1AP50416 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC21.36■■□□□ 1.01
CPT1AP50416 GCSHP2-201ENST00000560971 527 ntBASIC21.36■■□□□ 1.01
CPT1AP50416 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.36■■□□□ 1.01
CPT1AP50416 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC21.36■■□□□ 1.01
CPT1AP50416 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPT1AP50416 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPT1AP50416 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.36■■□□□ 1.01
CPT1AP50416 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CPT1AP50416 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPT1AP50416 AC104417.2-201ENST00000562989 1793 ntBASIC21.36■■□□□ 1.01
CPT1AP50416 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.36■■□□□ 1.01
CPT1AP50416 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPT1AP50416 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CPT1AP50416 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CPT1AP50416 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.35■■□□□ 1.01
CPT1AP50416 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CPT1AP50416 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CPT1AP50416 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPT1AP50416 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPT1AP50416 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.35■■□□□ 1.01
CPT1AP50416 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CPT1AP50416 KRT18P48-201ENST00000434763 852 ntBASIC21.35■■□□□ 1.01
CPT1AP50416 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.35■■□□□ 1.01
CPT1AP50416 ZNF444P1-201ENST00000559497 298 ntBASIC21.35■■□□□ 1.01
CPT1AP50416 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.35■■□□□ 1.01
CPT1AP50416 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CPT1AP50416 AC069148.1-201ENST00000608741 768 ntBASIC21.35■■□□□ 1.01
CPT1AP50416 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPT1AP50416 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CPT1AP50416 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPT1AP50416 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPT1AP50416 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.34■■□□□ 1.01
CPT1AP50416 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.34■■□□□ 1.01
CPT1AP50416 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPT1AP50416 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.34■■□□□ 1.01
CPT1AP50416 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.34■■□□□ 1.01
CPT1AP50416 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CPT1AP50416 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CPT1AP50416 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CPT1AP50416 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPT1AP50416 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.34■■□□□ 1.01
CPT1AP50416 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.34■■□□□ 1.01
CPT1AP50416 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.34■■□□□ 1.01
CPT1AP50416 KRT126P-201ENST00000549467 1181 ntBASIC21.34■■□□□ 1.01
CPT1AP50416 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.34■■□□□ 1.01
CPT1AP50416 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPT1AP50416 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CPT1AP50416 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPT1AP50416 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CPT1AP50416 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPT1AP50416 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
CPT1AP50416 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
CPT1AP50416 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CPT1AP50416 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.33■■□□□ 1.01
CPT1AP50416 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
CPT1AP50416 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CPT1AP50416 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
CPT1AP50416 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CPT1AP50416 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CPT1AP50416 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.33■■□□□ 1.01
CPT1AP50416 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
CPT1AP50416 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.33■■□□□ 1.01
CPT1AP50416 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CPT1AP50416 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.33■■□□□ 1.01
CPT1AP50416 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.33■■□□□ 1.01
CPT1AP50416 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.33■■□□□ 1.01
CPT1AP50416 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.33■■□□□ 1.01
CPT1AP50416 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.33■■□□□ 1.01
CPT1AP50416 MIR4674-201ENST00000582457 87 ntBASIC21.33■■□□□ 1.01
CPT1AP50416 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CPT1AP50416 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.33■■□□□ 1.01
CPT1AP50416 AC083849.1-201ENST00000615227 514 ntBASIC21.33■■□□□ 1.01
CPT1AP50416 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.33■■□□□ 1
CPT1AP50416 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.33■■□□□ 1
CPT1AP50416 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.33■■□□□ 1
CPT1AP50416 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
CPT1AP50416 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.33■■□□□ 1
CPT1AP50416 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CPT1AP50416 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CPT1AP50416 ZNF815P-204ENST00000434898 1737 ntBASIC21.32■■□□□ 1
CPT1AP50416 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.32■■□□□ 1
CPT1AP50416 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CPT1AP50416 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 383.7 ms