Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MTHFRP42898 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
MTHFRP42898 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MTHFRP42898 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.17■□□□□ 0.82
MTHFRP42898 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MTHFRP42898 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MTHFRP42898 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MTHFRP42898 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MTHFRP42898 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MTHFRP42898 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.17■□□□□ 0.82
MTHFRP42898 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.17■□□□□ 0.82
MTHFRP42898 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.17■□□□□ 0.82
MTHFRP42898 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.17■□□□□ 0.82
MTHFRP42898 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.17■□□□□ 0.82
MTHFRP42898 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.17■□□□□ 0.82
MTHFRP42898 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.17■□□□□ 0.82
MTHFRP42898 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
MTHFRP42898 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.17■□□□□ 0.82
MTHFRP42898 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MTHFRP42898 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MTHFRP42898 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
MTHFRP42898 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
MTHFRP42898 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.16■□□□□ 0.82
MTHFRP42898 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MTHFRP42898 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
MTHFRP42898 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MTHFRP42898 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
MTHFRP42898 STARP1-201ENST00000397973 869 ntBASIC20.16■□□□□ 0.82
MTHFRP42898 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.16■□□□□ 0.82
MTHFRP42898 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.16■□□□□ 0.82
MTHFRP42898 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.16■□□□□ 0.82
MTHFRP42898 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MTHFRP42898 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.16■□□□□ 0.82
MTHFRP42898 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MTHFRP42898 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.16■□□□□ 0.82
MTHFRP42898 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.16■□□□□ 0.82
MTHFRP42898 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MTHFRP42898 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.15■□□□□ 0.82
MTHFRP42898 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
MTHFRP42898 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
MTHFRP42898 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MTHFRP42898 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
MTHFRP42898 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.15■□□□□ 0.82
MTHFRP42898 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
MTHFRP42898 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.15■□□□□ 0.82
MTHFRP42898 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
MTHFRP42898 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.15■□□□□ 0.82
MTHFRP42898 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
MTHFRP42898 AC083849.1-201ENST00000615227 514 ntBASIC20.15■□□□□ 0.82
MTHFRP42898 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MTHFRP42898 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
MTHFRP42898 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MTHFRP42898 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
MTHFRP42898 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.15■□□□□ 0.82
MTHFRP42898 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MTHFRP42898 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MTHFRP42898 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MTHFRP42898 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
MTHFRP42898 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MTHFRP42898 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
MTHFRP42898 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.15■□□□□ 0.82
MTHFRP42898 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
MTHFRP42898 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
MTHFRP42898 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.14■□□□□ 0.82
MTHFRP42898 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
MTHFRP42898 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
MTHFRP42898 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
MTHFRP42898 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.14■□□□□ 0.81
MTHFRP42898 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
MTHFRP42898 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
MTHFRP42898 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.14■□□□□ 0.81
MTHFRP42898 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
MTHFRP42898 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.14■□□□□ 0.81
MTHFRP42898 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MTHFRP42898 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MTHFRP42898 ATP5G2P1-201ENST00000433580 426 ntBASIC20.14■□□□□ 0.81
MTHFRP42898 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.14■□□□□ 0.81
MTHFRP42898 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.14■□□□□ 0.81
MTHFRP42898 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.14■□□□□ 0.81
MTHFRP42898 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
MTHFRP42898 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.14■□□□□ 0.81
MTHFRP42898 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MTHFRP42898 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MTHFRP42898 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.14■□□□□ 0.81
MTHFRP42898 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.14■□□□□ 0.81
MTHFRP42898 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MTHFRP42898 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
MTHFRP42898 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
MTHFRP42898 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MTHFRP42898 LINC01311-201ENST00000565162 1445 ntBASIC20.13■□□□□ 0.81
MTHFRP42898 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.13■□□□□ 0.81
MTHFRP42898 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.13■□□□□ 0.81
MTHFRP42898 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.13■□□□□ 0.81
MTHFRP42898 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.13■□□□□ 0.81
MTHFRP42898 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
MTHFRP42898 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
MTHFRP42898 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
MTHFRP42898 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.13■□□□□ 0.81
MTHFRP42898 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MTHFRP42898 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms