Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 AC233263.1-201ENST00000578059 224 ntBASIC18.79■□□□□ 0.6
SOX11P35716 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.79■□□□□ 0.6
SOX11P35716 AC069544.1-201ENST00000609399 999 ntBASIC18.79■□□□□ 0.6
SOX11P35716 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SOX11P35716 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SOX11P35716 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.79■□□□□ 0.6
SOX11P35716 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SOX11P35716 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SOX11P35716 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SOX11P35716 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SOX11P35716 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SOX11P35716 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SOX11P35716 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.78■□□□□ 0.6
SOX11P35716 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SOX11P35716 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SOX11P35716 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SOX11P35716 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.78■□□□□ 0.6
SOX11P35716 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SOX11P35716 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.78■□□□□ 0.6
SOX11P35716 POM121L13P-201ENST00000422362 380 ntBASIC18.78■□□□□ 0.6
SOX11P35716 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.78■□□□□ 0.6
SOX11P35716 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.78■□□□□ 0.6
SOX11P35716 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SOX11P35716 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SOX11P35716 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.78■□□□□ 0.6
SOX11P35716 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.78■□□□□ 0.6
SOX11P35716 RN7SL471P-201ENST00000580476 299 ntBASIC18.78■□□□□ 0.6
SOX11P35716 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.78■□□□□ 0.6
SOX11P35716 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SOX11P35716 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SOX11P35716 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SOX11P35716 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SOX11P35716 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SOX11P35716 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SOX11P35716 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SOX11P35716 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SOX11P35716 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.78■□□□□ 0.6
SOX11P35716 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.78■□□□□ 0.6
SOX11P35716 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.77■□□□□ 0.6
SOX11P35716 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.77■□□□□ 0.6
SOX11P35716 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SOX11P35716 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.77■□□□□ 0.6
SOX11P35716 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SOX11P35716 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SOX11P35716 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SOX11P35716 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
SOX11P35716 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SOX11P35716 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.77■□□□□ 0.6
SOX11P35716 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.77■□□□□ 0.6
SOX11P35716 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.6
SOX11P35716 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SOX11P35716 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
SOX11P35716 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.77■□□□□ 0.6
SOX11P35716 UBE2SP1-201ENST00000450587 669 ntBASIC18.77■□□□□ 0.6
SOX11P35716 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.77■□□□□ 0.6
SOX11P35716 RPPH1-201ENST00000516869 333 ntBASIC18.77■□□□□ 0.6
SOX11P35716 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.77■□□□□ 0.6
SOX11P35716 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.77■□□□□ 0.6
SOX11P35716 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.77■□□□□ 0.6
SOX11P35716 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.77■□□□□ 0.6
SOX11P35716 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SOX11P35716 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.77■□□□□ 0.6
SOX11P35716 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
SOX11P35716 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SOX11P35716 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SOX11P35716 Z82202.1-201ENST00000623446 1880 ntBASIC18.77■□□□□ 0.6
SOX11P35716 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SOX11P35716 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SOX11P35716 AC007613.1-201ENST00000572811 2597 ntBASIC18.77■□□□□ 0.59
SOX11P35716 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.77■□□□□ 0.59
SOX11P35716 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SOX11P35716 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SOX11P35716 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SOX11P35716 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SOX11P35716 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.76■□□□□ 0.59
SOX11P35716 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SOX11P35716 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.76■□□□□ 0.59
SOX11P35716 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SOX11P35716 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SOX11P35716 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
SOX11P35716 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SOX11P35716 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.76■□□□□ 0.59
SOX11P35716 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SOX11P35716 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SOX11P35716 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SOX11P35716 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.76■□□□□ 0.59
SOX11P35716 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SOX11P35716 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.76■□□□□ 0.59
SOX11P35716 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.76■□□□□ 0.59
SOX11P35716 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.76■□□□□ 0.59
SOX11P35716 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SOX11P35716 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SOX11P35716 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SOX11P35716 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.76■□□□□ 0.59
SOX11P35716 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.76■□□□□ 0.59
SOX11P35716 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SOX11P35716 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
SOX11P35716 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.76■□□□□ 0.59
SOX11P35716 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SOX11P35716 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms