Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 DUX4L16-201ENST00000555130 1264 ntBASIC21.87■■□□□ 1.09
CLCN1P35523 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.87■■□□□ 1.09
CLCN1P35523 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CLCN1P35523 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLCN1P35523 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC21.87■■□□□ 1.09
CLCN1P35523 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CLCN1P35523 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
CLCN1P35523 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLCN1P35523 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLCN1P35523 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC21.86■■□□□ 1.09
CLCN1P35523 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC21.86■■□□□ 1.09
CLCN1P35523 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLCN1P35523 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLCN1P35523 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLCN1P35523 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC21.86■■□□□ 1.09
CLCN1P35523 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLCN1P35523 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLCN1P35523 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.86■■□□□ 1.09
CLCN1P35523 AC016769.1-201ENST00000409132 1010 ntBASIC21.86■■□□□ 1.09
CLCN1P35523 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
CLCN1P35523 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.86■■□□□ 1.09
CLCN1P35523 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.86■■□□□ 1.09
CLCN1P35523 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CLCN1P35523 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.86■■□□□ 1.09
CLCN1P35523 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.86■■□□□ 1.09
CLCN1P35523 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.86■■□□□ 1.09
CLCN1P35523 AC011767.1-201ENST00000617410 1153 ntBASIC21.86■■□□□ 1.09
CLCN1P35523 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLCN1P35523 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLCN1P35523 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
CLCN1P35523 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
CLCN1P35523 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
CLCN1P35523 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.86■■□□□ 1.09
CLCN1P35523 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLCN1P35523 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CLCN1P35523 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLCN1P35523 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CLCN1P35523 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC21.85■■□□□ 1.09
CLCN1P35523 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLCN1P35523 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CLCN1P35523 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC21.85■■□□□ 1.09
CLCN1P35523 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CLCN1P35523 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLCN1P35523 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.85■■□□□ 1.09
CLCN1P35523 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.85■■□□□ 1.09
CLCN1P35523 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLCN1P35523 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLCN1P35523 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLCN1P35523 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLCN1P35523 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CLCN1P35523 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLCN1P35523 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
CLCN1P35523 AC007322.4-201ENST00000509611 723 ntBASIC21.85■■□□□ 1.09
CLCN1P35523 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.85■■□□□ 1.09
CLCN1P35523 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.85■■□□□ 1.09
CLCN1P35523 AC022517.1-201ENST00000592429 346 ntBASIC21.85■■□□□ 1.09
CLCN1P35523 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
CLCN1P35523 AL591742.1-201ENST00000604433 565 ntBASIC21.85■■□□□ 1.09
CLCN1P35523 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLCN1P35523 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLCN1P35523 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLCN1P35523 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLCN1P35523 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.85■■□□□ 1.09
CLCN1P35523 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLCN1P35523 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLCN1P35523 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CLCN1P35523 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLCN1P35523 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.85■■□□□ 1.09
CLCN1P35523 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
CLCN1P35523 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CLCN1P35523 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLCN1P35523 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.84■■□□□ 1.09
CLCN1P35523 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLCN1P35523 AL161938.1-201ENST00000569833 2180 ntBASIC21.84■■□□□ 1.09
CLCN1P35523 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLCN1P35523 GATB-213ENST00000515812 1893 ntTSL 5 BASIC21.84■■□□□ 1.09
CLCN1P35523 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLCN1P35523 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLCN1P35523 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC21.84■■□□□ 1.09
CLCN1P35523 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CLCN1P35523 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLCN1P35523 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CLCN1P35523 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CLCN1P35523 CNN2P6-201ENST00000439038 900 ntBASIC21.84■■□□□ 1.09
CLCN1P35523 CDV3P1-201ENST00000471403 739 ntBASIC21.84■■□□□ 1.09
CLCN1P35523 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.84■■□□□ 1.09
CLCN1P35523 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.84■■□□□ 1.09
CLCN1P35523 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
CLCN1P35523 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.84■■□□□ 1.09
CLCN1P35523 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLCN1P35523 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CLCN1P35523 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLCN1P35523 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CLCN1P35523 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
CLCN1P35523 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLCN1P35523 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLCN1P35523 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLCN1P35523 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC21.84■■□□□ 1.09
CLCN1P35523 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLCN1P35523 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms