Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN6P29350 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN6P29350 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN6P29350 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN6P29350 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.28■□□□□ 0.52
PTPN6P29350 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN6P29350 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PTPN6P29350 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN6P29350 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.28■□□□□ 0.52
PTPN6P29350 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN6P29350 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.28■□□□□ 0.52
PTPN6P29350 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.28■□□□□ 0.52
PTPN6P29350 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.28■□□□□ 0.52
PTPN6P29350 AC006557.6-201ENST00000623071 864 ntBASIC18.28■□□□□ 0.52
PTPN6P29350 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN6P29350 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
PTPN6P29350 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.28■□□□□ 0.52
PTPN6P29350 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN6P29350 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN6P29350 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN6P29350 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.28■□□□□ 0.52
PTPN6P29350 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
PTPN6P29350 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PTPN6P29350 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PTPN6P29350 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.27■□□□□ 0.52
PTPN6P29350 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PTPN6P29350 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTPN6P29350 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTPN6P29350 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PTPN6P29350 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTPN6P29350 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.27■□□□□ 0.52
PTPN6P29350 AC128676.1-201ENST00000454392 318 ntBASIC18.27■□□□□ 0.52
PTPN6P29350 RPS2P52-201ENST00000469610 820 ntBASIC18.27■□□□□ 0.52
PTPN6P29350 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.27■□□□□ 0.52
PTPN6P29350 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.27■□□□□ 0.52
PTPN6P29350 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.27■□□□□ 0.52
PTPN6P29350 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PTPN6P29350 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.27■□□□□ 0.52
PTPN6P29350 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PTPN6P29350 AC008687.6-201ENST00000596318 630 ntBASIC18.27■□□□□ 0.52
PTPN6P29350 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.27■□□□□ 0.52
PTPN6P29350 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTPN6P29350 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PTPN6P29350 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.51
PTPN6P29350 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.27■□□□□ 0.51
PTPN6P29350 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.27■□□□□ 0.51
PTPN6P29350 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.27■□□□□ 0.51
PTPN6P29350 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PTPN6P29350 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN6P29350 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN6P29350 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN6P29350 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN6P29350 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN6P29350 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.26■□□□□ 0.51
PTPN6P29350 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN6P29350 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN6P29350 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN6P29350 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN6P29350 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN6P29350 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PTPN6P29350 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.26■□□□□ 0.51
PTPN6P29350 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PTPN6P29350 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN6P29350 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.26■□□□□ 0.51
PTPN6P29350 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN6P29350 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN6P29350 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PTPN6P29350 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.26■□□□□ 0.51
PTPN6P29350 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN6P29350 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN6P29350 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.25■□□□□ 0.51
PTPN6P29350 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.25■□□□□ 0.51
PTPN6P29350 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN6P29350 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN6P29350 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN6P29350 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.25■□□□□ 0.51
PTPN6P29350 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PTPN6P29350 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
PTPN6P29350 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PTPN6P29350 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN6P29350 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN6P29350 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PTPN6P29350 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN6P29350 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN6P29350 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN6P29350 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN6P29350 PRORSD1P-201ENST00000295112 541 ntBASIC18.25■□□□□ 0.51
PTPN6P29350 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN6P29350 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.25■□□□□ 0.51
PTPN6P29350 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN6P29350 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.25■□□□□ 0.51
PTPN6P29350 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.25■□□□□ 0.51
PTPN6P29350 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.25■□□□□ 0.51
PTPN6P29350 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.25■□□□□ 0.51
PTPN6P29350 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.25■□□□□ 0.51
PTPN6P29350 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.25■□□□□ 0.51
PTPN6P29350 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.25■□□□□ 0.51
PTPN6P29350 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN6P29350 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN6P29350 AC073648.6-201ENST00000641589 218 ntBASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms