Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.5■□□□□ 0.39
GDF1P27539 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
GDF1P27539 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
GDF1P27539 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.5■□□□□ 0.39
GDF1P27539 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GDF1P27539 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GDF1P27539 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
GDF1P27539 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GDF1P27539 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.49■□□□□ 0.39
GDF1P27539 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
GDF1P27539 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GDF1P27539 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GDF1P27539 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GDF1P27539 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GDF1P27539 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.49■□□□□ 0.39
GDF1P27539 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GDF1P27539 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GDF1P27539 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.49■□□□□ 0.39
GDF1P27539 AC008040.2-201ENST00000461049 708 ntBASIC17.49■□□□□ 0.39
GDF1P27539 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.49■□□□□ 0.39
GDF1P27539 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.49■□□□□ 0.39
GDF1P27539 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
GDF1P27539 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GDF1P27539 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GDF1P27539 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.49■□□□□ 0.39
GDF1P27539 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
GDF1P27539 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GDF1P27539 LINC01568-207ENST00000641790 1380 ntBASIC17.49■□□□□ 0.39
GDF1P27539 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.49■□□□□ 0.39
GDF1P27539 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
GDF1P27539 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.49■□□□□ 0.39
GDF1P27539 CYP2D8P-201ENST00000433633 1490 ntBASIC17.49■□□□□ 0.39
GDF1P27539 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GDF1P27539 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
GDF1P27539 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GDF1P27539 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GDF1P27539 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GDF1P27539 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GDF1P27539 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
GDF1P27539 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GDF1P27539 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GDF1P27539 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GDF1P27539 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GDF1P27539 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
GDF1P27539 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
GDF1P27539 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GDF1P27539 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
GDF1P27539 MFAP1P1-201ENST00000442257 1255 ntBASIC17.48■□□□□ 0.39
GDF1P27539 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.48■□□□□ 0.39
GDF1P27539 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.48■□□□□ 0.39
GDF1P27539 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.48■□□□□ 0.39
GDF1P27539 AC097493.4-201ENST00000641197 219 ntBASIC17.48■□□□□ 0.39
GDF1P27539 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GDF1P27539 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GDF1P27539 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.48■□□□□ 0.39
GDF1P27539 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
GDF1P27539 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GDF1P27539 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GDF1P27539 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
GDF1P27539 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GDF1P27539 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.47■□□□□ 0.39
GDF1P27539 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GDF1P27539 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
GDF1P27539 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
GDF1P27539 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.47■□□□□ 0.39
GDF1P27539 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GDF1P27539 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GDF1P27539 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
GDF1P27539 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.47■□□□□ 0.39
GDF1P27539 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.47■□□□□ 0.39
GDF1P27539 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.47■□□□□ 0.39
GDF1P27539 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.47■□□□□ 0.39
GDF1P27539 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.47■□□□□ 0.39
GDF1P27539 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.47■□□□□ 0.39
GDF1P27539 AC145285.6-201ENST00000604632 637 ntBASIC17.47■□□□□ 0.39
GDF1P27539 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.47■□□□□ 0.39
GDF1P27539 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.47■□□□□ 0.39
GDF1P27539 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
GDF1P27539 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.47■□□□□ 0.39
GDF1P27539 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GDF1P27539 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.47■□□□□ 0.39
GDF1P27539 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GDF1P27539 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GDF1P27539 ZNF815P-204ENST00000434898 1737 ntBASIC17.47■□□□□ 0.39
GDF1P27539 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.47■□□□□ 0.39
GDF1P27539 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
GDF1P27539 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
GDF1P27539 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GDF1P27539 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
GDF1P27539 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.46■□□□□ 0.39
GDF1P27539 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GDF1P27539 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.46■□□□□ 0.39
GDF1P27539 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.46■□□□□ 0.39
GDF1P27539 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GDF1P27539 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GDF1P27539 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
GDF1P27539 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.46■□□□□ 0.39
GDF1P27539 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
GDF1P27539 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.46■□□□□ 0.39
GDF1P27539 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms