Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
RFX1P22670 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
RFX1P22670 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFX1P22670 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFX1P22670 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFX1P22670 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFX1P22670 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.97■□□□□ 0.95
RFX1P22670 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.97■□□□□ 0.95
RFX1P22670 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.97■□□□□ 0.95
RFX1P22670 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.97■□□□□ 0.95
RFX1P22670 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
RFX1P22670 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RFX1P22670 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RFX1P22670 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.97■□□□□ 0.95
RFX1P22670 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFX1P22670 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.97■□□□□ 0.95
RFX1P22670 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RFX1P22670 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RFX1P22670 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
RFX1P22670 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.97■□□□□ 0.95
RFX1P22670 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.97■□□□□ 0.95
RFX1P22670 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFX1P22670 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFX1P22670 KRT8P8-201ENST00000434750 1448 ntBASIC20.96■□□□□ 0.95
RFX1P22670 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RFX1P22670 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFX1P22670 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFX1P22670 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.96■□□□□ 0.95
RFX1P22670 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFX1P22670 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
RFX1P22670 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFX1P22670 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
RFX1P22670 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
RFX1P22670 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFX1P22670 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFX1P22670 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFX1P22670 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.96■□□□□ 0.95
RFX1P22670 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.96■□□□□ 0.95
RFX1P22670 AL355355.2-201ENST00000442321 338 ntBASIC20.96■□□□□ 0.95
RFX1P22670 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.96■□□□□ 0.95
RFX1P22670 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.96■□□□□ 0.95
RFX1P22670 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.96■□□□□ 0.95
RFX1P22670 AL590326.2-201ENST00000625139 305 ntBASIC20.96■□□□□ 0.95
RFX1P22670 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
RFX1P22670 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.96■□□□□ 0.95
RFX1P22670 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.96■□□□□ 0.95
RFX1P22670 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RFX1P22670 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RFX1P22670 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFX1P22670 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RFX1P22670 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFX1P22670 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFX1P22670 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.96■□□□□ 0.95
RFX1P22670 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
RFX1P22670 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RFX1P22670 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.95■□□□□ 0.95
RFX1P22670 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.95■□□□□ 0.95
RFX1P22670 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
RFX1P22670 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.95■□□□□ 0.94
RFX1P22670 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFX1P22670 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFX1P22670 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.95■□□□□ 0.94
RFX1P22670 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFX1P22670 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RFX1P22670 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RFX1P22670 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RFX1P22670 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFX1P22670 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RFX1P22670 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RFX1P22670 KRT18P16-201ENST00000510337 1294 ntBASIC20.95■□□□□ 0.94
RFX1P22670 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RFX1P22670 AC026471.5-201ENST00000615068 467 ntBASIC20.95■□□□□ 0.94
RFX1P22670 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.95■□□□□ 0.94
RFX1P22670 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFX1P22670 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RFX1P22670 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFX1P22670 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
RFX1P22670 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.95■□□□□ 0.94
RFX1P22670 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFX1P22670 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFX1P22670 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.94■□□□□ 0.94
RFX1P22670 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
RFX1P22670 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.94■□□□□ 0.94
RFX1P22670 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RFX1P22670 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFX1P22670 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFX1P22670 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFX1P22670 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
RFX1P22670 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.94■□□□□ 0.94
RFX1P22670 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RFX1P22670 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.94■□□□□ 0.94
RFX1P22670 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.94■□□□□ 0.94
RFX1P22670 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFX1P22670 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
RFX1P22670 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.94■□□□□ 0.94
RFX1P22670 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFX1P22670 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFX1P22670 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFX1P22670 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFX1P22670 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms