Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNFRSF1BP20333 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TNFRSF1BP20333 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TNFRSF1BP20333 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNFRSF1BP20333 AC104417.2-201ENST00000562989 1793 ntBASIC17.9■□□□□ 0.46
TNFRSF1BP20333 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNFRSF1BP20333 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNFRSF1BP20333 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.9■□□□□ 0.46
TNFRSF1BP20333 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TNFRSF1BP20333 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.9■□□□□ 0.46
TNFRSF1BP20333 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TNFRSF1BP20333 RPS2P52-201ENST00000469610 820 ntBASIC17.9■□□□□ 0.46
TNFRSF1BP20333 RAP2CP1-201ENST00000605103 478 ntBASIC17.9■□□□□ 0.46
TNFRSF1BP20333 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNFRSF1BP20333 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNFRSF1BP20333 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNFRSF1BP20333 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.9■□□□□ 0.46
TNFRSF1BP20333 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNFRSF1BP20333 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNFRSF1BP20333 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNFRSF1BP20333 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TNFRSF1BP20333 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TNFRSF1BP20333 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.9■□□□□ 0.46
TNFRSF1BP20333 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TNFRSF1BP20333 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TNFRSF1BP20333 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
TNFRSF1BP20333 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
TNFRSF1BP20333 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TNFRSF1BP20333 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TNFRSF1BP20333 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.89■□□□□ 0.45
TNFRSF1BP20333 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNFRSF1BP20333 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNFRSF1BP20333 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TNFRSF1BP20333 AC073210.2-201ENST00000430369 194 ntBASIC17.89■□□□□ 0.45
TNFRSF1BP20333 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TNFRSF1BP20333 AC026185.1-201ENST00000445748 174 ntBASIC17.89■□□□□ 0.45
TNFRSF1BP20333 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.89■□□□□ 0.45
TNFRSF1BP20333 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.89■□□□□ 0.45
TNFRSF1BP20333 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNFRSF1BP20333 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TNFRSF1BP20333 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
TNFRSF1BP20333 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.89■□□□□ 0.45
TNFRSF1BP20333 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.89■□□□□ 0.45
TNFRSF1BP20333 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNFRSF1BP20333 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNFRSF1BP20333 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNFRSF1BP20333 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TNFRSF1BP20333 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNFRSF1BP20333 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNFRSF1BP20333 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNFRSF1BP20333 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNFRSF1BP20333 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNFRSF1BP20333 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNFRSF1BP20333 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TNFRSF1BP20333 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TNFRSF1BP20333 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TNFRSF1BP20333 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TNFRSF1BP20333 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNFRSF1BP20333 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNFRSF1BP20333 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.88■□□□□ 0.45
TNFRSF1BP20333 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNFRSF1BP20333 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNFRSF1BP20333 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNFRSF1BP20333 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.88■□□□□ 0.45
TNFRSF1BP20333 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.88■□□□□ 0.45
TNFRSF1BP20333 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNFRSF1BP20333 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.88■□□□□ 0.45
TNFRSF1BP20333 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.88■□□□□ 0.45
TNFRSF1BP20333 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TNFRSF1BP20333 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.88■□□□□ 0.45
TNFRSF1BP20333 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNFRSF1BP20333 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNFRSF1BP20333 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TNFRSF1BP20333 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TNFRSF1BP20333 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNFRSF1BP20333 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.87■□□□□ 0.45
TNFRSF1BP20333 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
TNFRSF1BP20333 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
TNFRSF1BP20333 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNFRSF1BP20333 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TNFRSF1BP20333 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNFRSF1BP20333 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNFRSF1BP20333 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNFRSF1BP20333 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.87■□□□□ 0.45
TNFRSF1BP20333 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.87■□□□□ 0.45
TNFRSF1BP20333 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.87■□□□□ 0.45
TNFRSF1BP20333 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNFRSF1BP20333 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNFRSF1BP20333 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNFRSF1BP20333 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNFRSF1BP20333 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.87■□□□□ 0.45
TNFRSF1BP20333 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TNFRSF1BP20333 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
TNFRSF1BP20333 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
TNFRSF1BP20333 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
TNFRSF1BP20333 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.87■□□□□ 0.45
TNFRSF1BP20333 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.87■□□□□ 0.45
TNFRSF1BP20333 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TNFRSF1BP20333 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.87■□□□□ 0.45
TNFRSF1BP20333 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms