Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC2P18074 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC2P18074 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
ERCC2P18074 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC2P18074 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.84■□□□□ 0.77
ERCC2P18074 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.84■□□□□ 0.77
ERCC2P18074 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.84■□□□□ 0.77
ERCC2P18074 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.84■□□□□ 0.77
ERCC2P18074 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC2P18074 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC2P18074 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
ERCC2P18074 KSR1P1-201ENST00000446298 240 ntBASIC19.84■□□□□ 0.77
ERCC2P18074 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC2P18074 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.84■□□□□ 0.77
ERCC2P18074 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC2P18074 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC2P18074 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC2P18074 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC2P18074 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC2P18074 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC2P18074 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.84■□□□□ 0.77
ERCC2P18074 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC2P18074 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.84■□□□□ 0.77
ERCC2P18074 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.83■□□□□ 0.77
ERCC2P18074 AC141586.3-201ENST00000562166 1838 ntBASIC19.83■□□□□ 0.77
ERCC2P18074 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ERCC2P18074 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.83■□□□□ 0.77
ERCC2P18074 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
ERCC2P18074 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ERCC2P18074 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ERCC2P18074 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
ERCC2P18074 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.83■□□□□ 0.77
ERCC2P18074 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.83■□□□□ 0.77
ERCC2P18074 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ERCC2P18074 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
ERCC2P18074 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ERCC2P18074 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ERCC2P18074 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ERCC2P18074 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
ERCC2P18074 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ERCC2P18074 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.82■□□□□ 0.76
ERCC2P18074 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ERCC2P18074 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ERCC2P18074 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ERCC2P18074 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ERCC2P18074 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ERCC2P18074 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ERCC2P18074 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ERCC2P18074 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ERCC2P18074 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ERCC2P18074 AC004980.1-204ENST00000429707 299 ntBASIC19.82■□□□□ 0.76
ERCC2P18074 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ERCC2P18074 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.82■□□□□ 0.76
ERCC2P18074 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.82■□□□□ 0.76
ERCC2P18074 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.82■□□□□ 0.76
ERCC2P18074 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.82■□□□□ 0.76
ERCC2P18074 AC073195.1-201ENST00000607241 877 ntBASIC19.82■□□□□ 0.76
ERCC2P18074 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.82■□□□□ 0.76
ERCC2P18074 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ERCC2P18074 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
ERCC2P18074 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
ERCC2P18074 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ERCC2P18074 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
ERCC2P18074 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.82■□□□□ 0.76
ERCC2P18074 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ERCC2P18074 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ERCC2P18074 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ERCC2P18074 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
ERCC2P18074 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
ERCC2P18074 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ERCC2P18074 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.81■□□□□ 0.76
ERCC2P18074 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ERCC2P18074 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ERCC2P18074 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.81■□□□□ 0.76
ERCC2P18074 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
ERCC2P18074 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
ERCC2P18074 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ERCC2P18074 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ERCC2P18074 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
ERCC2P18074 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.81■□□□□ 0.76
ERCC2P18074 Z85996.1-201ENST00000494644 937 ntBASIC19.81■□□□□ 0.76
ERCC2P18074 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ERCC2P18074 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.81■□□□□ 0.76
ERCC2P18074 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.81■□□□□ 0.76
ERCC2P18074 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.81■□□□□ 0.76
ERCC2P18074 AC131212.4-201ENST00000623606 975 ntBASIC19.81■□□□□ 0.76
ERCC2P18074 CR392000.1-201ENST00000624770 1228 ntBASIC19.81■□□□□ 0.76
ERCC2P18074 AL135905.2-201ENST00000584934 1404 ntBASIC19.81■□□□□ 0.76
ERCC2P18074 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.81■□□□□ 0.76
ERCC2P18074 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ERCC2P18074 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
ERCC2P18074 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.81■□□□□ 0.76
ERCC2P18074 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ERCC2P18074 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
ERCC2P18074 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ERCC2P18074 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.81■□□□□ 0.76
ERCC2P18074 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ERCC2P18074 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.81■□□□□ 0.76
ERCC2P18074 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
ERCC2P18074 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms