Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTPN1P18031 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.44■□□□□ 0.86
PTPN1P18031 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTPN1P18031 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTPN1P18031 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.43■□□□□ 0.86
PTPN1P18031 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
PTPN1P18031 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTPN1P18031 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
PTPN1P18031 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTPN1P18031 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.43■□□□□ 0.86
PTPN1P18031 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
PTPN1P18031 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.43■□□□□ 0.86
PTPN1P18031 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTPN1P18031 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
PTPN1P18031 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.43■□□□□ 0.86
PTPN1P18031 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.43■□□□□ 0.86
PTPN1P18031 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PTPN1P18031 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTPN1P18031 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PTPN1P18031 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTPN1P18031 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.42■□□□□ 0.86
PTPN1P18031 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTPN1P18031 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTPN1P18031 CRYGFP-201ENST00000418459 633 ntBASIC20.42■□□□□ 0.86
PTPN1P18031 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.42■□□□□ 0.86
PTPN1P18031 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.42■□□□□ 0.86
PTPN1P18031 AP005242.2-201ENST00000580065 1175 ntBASIC20.42■□□□□ 0.86
PTPN1P18031 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.42■□□□□ 0.86
PTPN1P18031 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.42■□□□□ 0.86
PTPN1P18031 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.42■□□□□ 0.86
PTPN1P18031 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.42■□□□□ 0.86
PTPN1P18031 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PTPN1P18031 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PTPN1P18031 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN1P18031 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN1P18031 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.41■□□□□ 0.86
PTPN1P18031 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN1P18031 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.41■□□□□ 0.86
PTPN1P18031 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN1P18031 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN1P18031 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.41■□□□□ 0.86
PTPN1P18031 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.41■□□□□ 0.86
PTPN1P18031 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
PTPN1P18031 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN1P18031 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN1P18031 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
PTPN1P18031 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN1P18031 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTPN1P18031 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTPN1P18031 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PTPN1P18031 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
PTPN1P18031 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.4■□□□□ 0.86
PTPN1P18031 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTPN1P18031 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTPN1P18031 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTPN1P18031 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.4■□□□□ 0.86
PTPN1P18031 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.4■□□□□ 0.86
PTPN1P18031 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.4■□□□□ 0.86
PTPN1P18031 CYP2D8P-201ENST00000433633 1490 ntBASIC20.4■□□□□ 0.86
PTPN1P18031 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.4■□□□□ 0.86
PTPN1P18031 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.4■□□□□ 0.86
PTPN1P18031 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.4■□□□□ 0.86
PTPN1P18031 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTPN1P18031 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.4■□□□□ 0.86
PTPN1P18031 AC133561.5-201ENST00000635547 218 ntBASIC20.4■□□□□ 0.86
PTPN1P18031 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTPN1P18031 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PTPN1P18031 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PTPN1P18031 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.39■□□□□ 0.86
PTPN1P18031 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTPN1P18031 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTPN1P18031 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
PTPN1P18031 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTPN1P18031 AC096733.2-201ENST00000609937 1394 ntBASIC20.39■□□□□ 0.85
PTPN1P18031 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTPN1P18031 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.39■□□□□ 0.85
PTPN1P18031 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.39■□□□□ 0.85
PTPN1P18031 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.39■□□□□ 0.85
PTPN1P18031 MFAP1P1-201ENST00000442257 1255 ntBASIC20.39■□□□□ 0.85
PTPN1P18031 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.39■□□□□ 0.85
PTPN1P18031 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.39■□□□□ 0.85
PTPN1P18031 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.39■□□□□ 0.85
PTPN1P18031 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
PTPN1P18031 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
PTPN1P18031 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
PTPN1P18031 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.39■□□□□ 0.85
PTPN1P18031 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTPN1P18031 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.39■□□□□ 0.85
PTPN1P18031 Z82202.1-201ENST00000623446 1880 ntBASIC20.39■□□□□ 0.85
PTPN1P18031 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.39■□□□□ 0.85
PTPN1P18031 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.38■□□□□ 0.85
PTPN1P18031 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN1P18031 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN1P18031 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN1P18031 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.38■□□□□ 0.85
PTPN1P18031 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN1P18031 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN1P18031 ECEL1P3-201ENST00000427961 737 ntBASIC20.38■□□□□ 0.85
PTPN1P18031 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.38■□□□□ 0.85
PTPN1P18031 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms