Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
COL11A2P13942 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
COL11A2P13942 AL691432.2-201ENST00000607222 2038 ntBASIC23.65■■□□□ 1.38
COL11A2P13942 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
COL11A2P13942 GOLGA2P11-201ENST00000562660 1621 ntBASIC23.65■■□□□ 1.38
COL11A2P13942 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC23.65■■□□□ 1.38
COL11A2P13942 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
COL11A2P13942 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL11A2P13942 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC23.64■■□□□ 1.38
COL11A2P13942 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
COL11A2P13942 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC23.64■■□□□ 1.38
COL11A2P13942 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
COL11A2P13942 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
COL11A2P13942 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
COL11A2P13942 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
COL11A2P13942 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
COL11A2P13942 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC23.64■■□□□ 1.37
COL11A2P13942 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC23.64■■□□□ 1.37
COL11A2P13942 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
COL11A2P13942 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC23.64■■□□□ 1.37
COL11A2P13942 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC23.64■■□□□ 1.37
COL11A2P13942 AL845331.1-201ENST00000424978 1190 ntBASIC23.64■■□□□ 1.37
COL11A2P13942 CHCHD2P8-201ENST00000429873 447 ntBASIC23.64■■□□□ 1.37
COL11A2P13942 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC23.64■■□□□ 1.37
COL11A2P13942 AP002414.4-201ENST00000589764 1148 ntBASIC23.64■■□□□ 1.37
COL11A2P13942 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
COL11A2P13942 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
COL11A2P13942 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
COL11A2P13942 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
COL11A2P13942 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
COL11A2P13942 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
COL11A2P13942 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
COL11A2P13942 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
COL11A2P13942 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC23.63■■□□□ 1.37
COL11A2P13942 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
COL11A2P13942 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
COL11A2P13942 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
COL11A2P13942 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC23.63■■□□□ 1.37
COL11A2P13942 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC23.63■■□□□ 1.37
COL11A2P13942 AL671883.3-201ENST00000603274 991 ntBASIC23.63■■□□□ 1.37
COL11A2P13942 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
COL11A2P13942 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC23.63■■□□□ 1.37
COL11A2P13942 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC23.63■■□□□ 1.37
COL11A2P13942 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
COL11A2P13942 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
COL11A2P13942 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC23.63■■□□□ 1.37
COL11A2P13942 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC23.63■■□□□ 1.37
COL11A2P13942 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
COL11A2P13942 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
COL11A2P13942 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL11A2P13942 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
COL11A2P13942 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC23.62■■□□□ 1.37
COL11A2P13942 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL11A2P13942 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC23.62■■□□□ 1.37
COL11A2P13942 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC23.62■■□□□ 1.37
COL11A2P13942 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC23.62■■□□□ 1.37
COL11A2P13942 SLC25A6P4-201ENST00000586535 553 ntBASIC23.62■■□□□ 1.37
COL11A2P13942 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC23.62■■□□□ 1.37
COL11A2P13942 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC23.62■■□□□ 1.37
COL11A2P13942 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
COL11A2P13942 AC079602.3-201ENST00000623931 403 ntBASIC23.62■■□□□ 1.37
COL11A2P13942 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL11A2P13942 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC23.62■■□□□ 1.37
COL11A2P13942 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC23.62■■□□□ 1.37
COL11A2P13942 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL11A2P13942 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL11A2P13942 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
COL11A2P13942 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL11A2P13942 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
COL11A2P13942 AL022342.1-201ENST00000400363 863 ntBASIC23.62■■□□□ 1.37
COL11A2P13942 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC23.62■■□□□ 1.37
COL11A2P13942 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC23.62■■□□□ 1.37
COL11A2P13942 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL11A2P13942 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
COL11A2P13942 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23.61■■□□□ 1.37
COL11A2P13942 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
COL11A2P13942 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC23.61■■□□□ 1.37
COL11A2P13942 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
COL11A2P13942 AL162741.1-201ENST00000565563 1558 ntBASIC23.61■■□□□ 1.37
COL11A2P13942 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
COL11A2P13942 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
COL11A2P13942 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC23.61■■□□□ 1.37
COL11A2P13942 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
COL11A2P13942 HLA-F-220ENST00000434407 884 ntBASIC23.61■■□□□ 1.37
COL11A2P13942 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
COL11A2P13942 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
COL11A2P13942 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
COL11A2P13942 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
COL11A2P13942 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
COL11A2P13942 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
COL11A2P13942 AC104417.2-201ENST00000562989 1793 ntBASIC23.6■■□□□ 1.37
COL11A2P13942 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC23.6■■□□□ 1.37
COL11A2P13942 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
COL11A2P13942 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL11A2P13942 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC23.6■■□□□ 1.37
COL11A2P13942 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL11A2P13942 FAAHP1-202ENST00000446499 1238 ntBASIC23.6■■□□□ 1.37
COL11A2P13942 CIB2-208ENST00000560618 804 ntTSL 2 BASIC23.6■■□□□ 1.37
COL11A2P13942 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC23.6■■□□□ 1.37
COL11A2P13942 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms