Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CCL4P13236 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.2■□□□□ 0.5
CCL4P13236 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCL4P13236 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCL4P13236 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCL4P13236 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CCL4P13236 AC099778.1-201ENST00000568593 1911 ntBASIC18.2■□□□□ 0.5
CCL4P13236 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCL4P13236 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
CCL4P13236 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CCL4P13236 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCL4P13236 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CCL4P13236 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCL4P13236 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCL4P13236 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.2■□□□□ 0.5
CCL4P13236 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.2■□□□□ 0.5
CCL4P13236 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCL4P13236 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.2■□□□□ 0.5
CCL4P13236 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
CCL4P13236 AC093458.2-201ENST00000623150 629 ntBASIC18.2■□□□□ 0.5
CCL4P13236 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCL4P13236 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CCL4P13236 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCL4P13236 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCL4P13236 AC005332.1-201ENST00000577698 1310 ntBASIC18.2■□□□□ 0.5
CCL4P13236 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCL4P13236 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCL4P13236 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCL4P13236 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCL4P13236 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.2■□□□□ 0.5
CCL4P13236 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCL4P13236 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
CCL4P13236 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCL4P13236 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCL4P13236 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.19■□□□□ 0.5
CCL4P13236 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.19■□□□□ 0.5
CCL4P13236 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCL4P13236 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.19■□□□□ 0.5
CCL4P13236 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.19■□□□□ 0.5
CCL4P13236 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
CCL4P13236 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCL4P13236 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCL4P13236 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.19■□□□□ 0.5
CCL4P13236 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CCL4P13236 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCL4P13236 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCL4P13236 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.19■□□□□ 0.5
CCL4P13236 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCL4P13236 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.19■□□□□ 0.5
CCL4P13236 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCL4P13236 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.19■□□□□ 0.5
CCL4P13236 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCL4P13236 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CCL4P13236 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCL4P13236 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCL4P13236 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCL4P13236 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCL4P13236 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCL4P13236 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCL4P13236 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCL4P13236 AC104417.2-201ENST00000562989 1793 ntBASIC18.18■□□□□ 0.5
CCL4P13236 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.18■□□□□ 0.5
CCL4P13236 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CCL4P13236 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.18■□□□□ 0.5
CCL4P13236 GCSHP2-201ENST00000560971 527 ntBASIC18.18■□□□□ 0.5
CCL4P13236 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.18■□□□□ 0.5
CCL4P13236 MIR4674-201ENST00000582457 87 ntBASIC18.18■□□□□ 0.5
CCL4P13236 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.18■□□□□ 0.5
CCL4P13236 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.18■□□□□ 0.5
CCL4P13236 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.18■□□□□ 0.5
CCL4P13236 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCL4P13236 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCL4P13236 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCL4P13236 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCL4P13236 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCL4P13236 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCL4P13236 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCL4P13236 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.17■□□□□ 0.5
CCL4P13236 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCL4P13236 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCL4P13236 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.17■□□□□ 0.5
CCL4P13236 AC112907.2-201ENST00000448639 330 ntBASIC18.17■□□□□ 0.5
CCL4P13236 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCL4P13236 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.17■□□□□ 0.5
CCL4P13236 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.17■□□□□ 0.5
CCL4P13236 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.17■□□□□ 0.5
CCL4P13236 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.17■□□□□ 0.5
CCL4P13236 AC116407.4-201ENST00000623319 1061 ntBASIC18.17■□□□□ 0.5
CCL4P13236 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CCL4P13236 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCL4P13236 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCL4P13236 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCL4P13236 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCL4P13236 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCL4P13236 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCL4P13236 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.17■□□□□ 0.5
CCL4P13236 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCL4P13236 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCL4P13236 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCL4P13236 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms