Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CCNYL3P0C7X3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.58■□□□□ 0.56
CCNYL3P0C7X3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCNYL3P0C7X3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCNYL3P0C7X3 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CCNYL3P0C7X3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.58■□□□□ 0.56
CCNYL3P0C7X3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCNYL3P0C7X3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.57■□□□□ 0.56
CCNYL3P0C7X3 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCNYL3P0C7X3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCNYL3P0C7X3 KRT18P22-201ENST00000402024 1347 ntBASIC18.57■□□□□ 0.56
CCNYL3P0C7X3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.57■□□□□ 0.56
CCNYL3P0C7X3 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.57■□□□□ 0.56
CCNYL3P0C7X3 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.57■□□□□ 0.56
CCNYL3P0C7X3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.57■□□□□ 0.56
CCNYL3P0C7X3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.57■□□□□ 0.56
CCNYL3P0C7X3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.57■□□□□ 0.56
CCNYL3P0C7X3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.57■□□□□ 0.56
CCNYL3P0C7X3 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.57■□□□□ 0.56
CCNYL3P0C7X3 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.57■□□□□ 0.56
CCNYL3P0C7X3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCNYL3P0C7X3 AL445675.2-201ENST00000620291 557 ntBASIC18.57■□□□□ 0.56
CCNYL3P0C7X3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCNYL3P0C7X3 AC131212.4-201ENST00000623606 975 ntBASIC18.57■□□□□ 0.56
CCNYL3P0C7X3 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CCNYL3P0C7X3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
CCNYL3P0C7X3 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCNYL3P0C7X3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCNYL3P0C7X3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCNYL3P0C7X3 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.57■□□□□ 0.56
CCNYL3P0C7X3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCNYL3P0C7X3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CCNYL3P0C7X3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCNYL3P0C7X3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCNYL3P0C7X3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCNYL3P0C7X3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCNYL3P0C7X3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCNYL3P0C7X3 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCNYL3P0C7X3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.56■□□□□ 0.56
CCNYL3P0C7X3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.56■□□□□ 0.56
CCNYL3P0C7X3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.56■□□□□ 0.56
CCNYL3P0C7X3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.56■□□□□ 0.56
CCNYL3P0C7X3 PHGDH-210ENST00000641115 1638 ntBASIC18.56■□□□□ 0.56
CCNYL3P0C7X3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCNYL3P0C7X3 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.56■□□□□ 0.56
CCNYL3P0C7X3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCNYL3P0C7X3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
CCNYL3P0C7X3 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCNYL3P0C7X3 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCNYL3P0C7X3 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CCNYL3P0C7X3 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.56■□□□□ 0.56
CCNYL3P0C7X3 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.56■□□□□ 0.56
CCNYL3P0C7X3 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCNYL3P0C7X3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.56■□□□□ 0.56
CCNYL3P0C7X3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCNYL3P0C7X3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.56■□□□□ 0.56
CCNYL3P0C7X3 AC026271.3-201ENST00000571884 352 ntBASIC18.56■□□□□ 0.56
CCNYL3P0C7X3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.56■□□□□ 0.56
CCNYL3P0C7X3 AC092865.7-201ENST00000641832 219 ntBASIC18.56■□□□□ 0.56
CCNYL3P0C7X3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.56■□□□□ 0.56
CCNYL3P0C7X3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.56■□□□□ 0.56
CCNYL3P0C7X3 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCNYL3P0C7X3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.56■□□□□ 0.56
CCNYL3P0C7X3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.56■□□□□ 0.56
CCNYL3P0C7X3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCNYL3P0C7X3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCNYL3P0C7X3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCNYL3P0C7X3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCNYL3P0C7X3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCNYL3P0C7X3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCNYL3P0C7X3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
CCNYL3P0C7X3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCNYL3P0C7X3 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCNYL3P0C7X3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCNYL3P0C7X3 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCNYL3P0C7X3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCNYL3P0C7X3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.55■□□□□ 0.56
CCNYL3P0C7X3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCNYL3P0C7X3 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCNYL3P0C7X3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCNYL3P0C7X3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCNYL3P0C7X3 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCNYL3P0C7X3 KRT18P16-201ENST00000510337 1294 ntBASIC18.55■□□□□ 0.56
CCNYL3P0C7X3 RN7SL850P-201ENST00000579959 291 ntBASIC18.55■□□□□ 0.56
CCNYL3P0C7X3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCNYL3P0C7X3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCNYL3P0C7X3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCNYL3P0C7X3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.55■□□□□ 0.56
CCNYL3P0C7X3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCNYL3P0C7X3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCNYL3P0C7X3 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCNYL3P0C7X3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCNYL3P0C7X3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCNYL3P0C7X3 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCNYL3P0C7X3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.54■□□□□ 0.56
CCNYL3P0C7X3 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCNYL3P0C7X3 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCNYL3P0C7X3 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCNYL3P0C7X3 AL390955.1-201ENST00000428694 934 ntBASIC18.54■□□□□ 0.56
CCNYL3P0C7X3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms