Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SRPRAP08240 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SRPRAP08240 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.48■□□□□ 0.71
SRPRAP08240 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.48■□□□□ 0.71
SRPRAP08240 AC092338.2-201ENST00000568827 1415 ntBASIC19.48■□□□□ 0.71
SRPRAP08240 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.48■□□□□ 0.71
SRPRAP08240 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SRPRAP08240 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.48■□□□□ 0.71
SRPRAP08240 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SRPRAP08240 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SRPRAP08240 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SRPRAP08240 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SRPRAP08240 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.47■□□□□ 0.71
SRPRAP08240 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.47■□□□□ 0.71
SRPRAP08240 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SRPRAP08240 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.47■□□□□ 0.71
SRPRAP08240 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SRPRAP08240 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SRPRAP08240 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.47■□□□□ 0.71
SRPRAP08240 KRT18P57-201ENST00000443599 1254 ntBASIC19.47■□□□□ 0.71
SRPRAP08240 ATP5G1P1-201ENST00000448724 379 ntBASIC19.47■□□□□ 0.71
SRPRAP08240 AC010203.1-204ENST00000548782 407 ntBASIC19.47■□□□□ 0.71
SRPRAP08240 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.47■□□□□ 0.71
SRPRAP08240 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.47■□□□□ 0.71
SRPRAP08240 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SRPRAP08240 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SRPRAP08240 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.47■□□□□ 0.71
SRPRAP08240 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SRPRAP08240 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SRPRAP08240 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
SRPRAP08240 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SRPRAP08240 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.47■□□□□ 0.71
SRPRAP08240 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SRPRAP08240 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
SRPRAP08240 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SRPRAP08240 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.47■□□□□ 0.71
SRPRAP08240 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.47■□□□□ 0.71
SRPRAP08240 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.47■□□□□ 0.71
SRPRAP08240 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SRPRAP08240 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
SRPRAP08240 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SRPRAP08240 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SRPRAP08240 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SRPRAP08240 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SRPRAP08240 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SRPRAP08240 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.46■□□□□ 0.71
SRPRAP08240 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.46■□□□□ 0.71
SRPRAP08240 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SRPRAP08240 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.46■□□□□ 0.71
SRPRAP08240 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
SRPRAP08240 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SRPRAP08240 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.46■□□□□ 0.71
SRPRAP08240 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.46■□□□□ 0.71
SRPRAP08240 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.46■□□□□ 0.71
SRPRAP08240 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SRPRAP08240 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SRPRAP08240 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SRPRAP08240 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.46■□□□□ 0.71
SRPRAP08240 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
SRPRAP08240 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.45■□□□□ 0.7
SRPRAP08240 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SRPRAP08240 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SRPRAP08240 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SRPRAP08240 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SRPRAP08240 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.45■□□□□ 0.7
SRPRAP08240 TSPY21P-201ENST00000433481 731 ntBASIC19.45■□□□□ 0.7
SRPRAP08240 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SRPRAP08240 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.45■□□□□ 0.7
SRPRAP08240 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.45■□□□□ 0.7
SRPRAP08240 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.45■□□□□ 0.7
SRPRAP08240 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.45■□□□□ 0.7
SRPRAP08240 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SRPRAP08240 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SRPRAP08240 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SRPRAP08240 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SRPRAP08240 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.45■□□□□ 0.7
SRPRAP08240 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
SRPRAP08240 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SRPRAP08240 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.45■□□□□ 0.7
SRPRAP08240 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.45■□□□□ 0.7
SRPRAP08240 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SRPRAP08240 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SRPRAP08240 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SRPRAP08240 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SRPRAP08240 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SRPRAP08240 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SRPRAP08240 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SRPRAP08240 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SRPRAP08240 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.44■□□□□ 0.7
SRPRAP08240 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.44■□□□□ 0.7
SRPRAP08240 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SRPRAP08240 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.44■□□□□ 0.7
SRPRAP08240 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SRPRAP08240 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SRPRAP08240 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SRPRAP08240 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SRPRAP08240 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SRPRAP08240 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.44■□□□□ 0.7
SRPRAP08240 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SRPRAP08240 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms