Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.66■□□□□ 0.58
KRT6AP02538 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRT6AP02538 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.66■□□□□ 0.58
KRT6AP02538 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT6AP02538 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRT6AP02538 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
KRT6AP02538 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
KRT6AP02538 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.66■□□□□ 0.58
KRT6AP02538 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.66■□□□□ 0.58
KRT6AP02538 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT6AP02538 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.66■□□□□ 0.58
KRT6AP02538 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT6AP02538 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
KRT6AP02538 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRT6AP02538 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRT6AP02538 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT6AP02538 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT6AP02538 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.66■□□□□ 0.58
KRT6AP02538 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
KRT6AP02538 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT6AP02538 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KRT6AP02538 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.65■□□□□ 0.58
KRT6AP02538 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT6AP02538 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KRT6AP02538 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT6AP02538 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT6AP02538 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.65■□□□□ 0.58
KRT6AP02538 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KRT6AP02538 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KRT6AP02538 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.65■□□□□ 0.58
KRT6AP02538 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT6AP02538 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT6AP02538 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT6AP02538 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
KRT6AP02538 UNC93B4-201ENST00000505679 747 ntBASIC18.65■□□□□ 0.58
KRT6AP02538 AC090192.1-201ENST00000517740 490 ntBASIC18.65■□□□□ 0.58
KRT6AP02538 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT6AP02538 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KRT6AP02538 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT6AP02538 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.65■□□□□ 0.58
KRT6AP02538 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.65■□□□□ 0.58
KRT6AP02538 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.65■□□□□ 0.58
KRT6AP02538 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT6AP02538 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT6AP02538 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
KRT6AP02538 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
KRT6AP02538 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
KRT6AP02538 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
KRT6AP02538 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
KRT6AP02538 AC020763.4-201ENST00000623414 4170 ntBASIC18.64■□□□□ 0.58
KRT6AP02538 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
KRT6AP02538 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
KRT6AP02538 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
KRT6AP02538 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
KRT6AP02538 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.64■□□□□ 0.57
KRT6AP02538 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
KRT6AP02538 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT6AP02538 AL161938.1-201ENST00000569833 2180 ntBASIC18.64■□□□□ 0.57
KRT6AP02538 LETM1P2-201ENST00000597330 2178 ntBASIC18.64■□□□□ 0.57
KRT6AP02538 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT6AP02538 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.64■□□□□ 0.57
KRT6AP02538 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT6AP02538 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT6AP02538 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.64■□□□□ 0.57
KRT6AP02538 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.64■□□□□ 0.57
KRT6AP02538 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.64■□□□□ 0.57
KRT6AP02538 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
KRT6AP02538 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.64■□□□□ 0.57
KRT6AP02538 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.64■□□□□ 0.57
KRT6AP02538 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
KRT6AP02538 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.64■□□□□ 0.57
KRT6AP02538 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KRT6AP02538 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT6AP02538 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
KRT6AP02538 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT6AP02538 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT6AP02538 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT6AP02538 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.64■□□□□ 0.57
KRT6AP02538 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT6AP02538 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.63■□□□□ 0.57
KRT6AP02538 AC026471.1-201ENST00000564629 3026 ntBASIC18.63■□□□□ 0.57
KRT6AP02538 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRT6AP02538 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRT6AP02538 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KRT6AP02538 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KRT6AP02538 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.63■□□□□ 0.57
KRT6AP02538 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRT6AP02538 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRT6AP02538 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KRT6AP02538 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.63■□□□□ 0.57
KRT6AP02538 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.63■□□□□ 0.57
KRT6AP02538 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.63■□□□□ 0.57
KRT6AP02538 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.63■□□□□ 0.57
KRT6AP02538 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRT6AP02538 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.63■□□□□ 0.57
KRT6AP02538 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRT6AP02538 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
KRT6AP02538 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRT6AP02538 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRT6AP02538 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms