Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DRAP01903 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.74■□□□□ 0.91
HLA-DRAP01903 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DRAP01903 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DRAP01903 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DRAP01903 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DRAP01903 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DRAP01903 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.74■□□□□ 0.91
HLA-DRAP01903 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DRAP01903 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DRAP01903 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.74■□□□□ 0.91
HLA-DRAP01903 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.74■□□□□ 0.91
HLA-DRAP01903 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.74■□□□□ 0.91
HLA-DRAP01903 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.74■□□□□ 0.91
HLA-DRAP01903 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DRAP01903 CD177P1-201ENST00000606252 935 ntBASIC20.74■□□□□ 0.91
HLA-DRAP01903 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DRAP01903 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.74■□□□□ 0.91
HLA-DRAP01903 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DRAP01903 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DRAP01903 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
HLA-DRAP01903 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DRAP01903 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DRAP01903 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DRAP01903 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DRAP01903 KRT8P41-201ENST00000533985 1514 ntBASIC20.73■□□□□ 0.91
HLA-DRAP01903 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DRAP01903 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.73■□□□□ 0.91
HLA-DRAP01903 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DRAP01903 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DRAP01903 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DRAP01903 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DRAP01903 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DRAP01903 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.73■□□□□ 0.91
HLA-DRAP01903 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
HLA-DRAP01903 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.73■□□□□ 0.91
HLA-DRAP01903 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.73■□□□□ 0.91
HLA-DRAP01903 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.73■□□□□ 0.91
HLA-DRAP01903 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DRAP01903 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.73■□□□□ 0.91
HLA-DRAP01903 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
HLA-DRAP01903 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DRAP01903 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.73■□□□□ 0.91
HLA-DRAP01903 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.73■□□□□ 0.91
HLA-DRAP01903 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.73■□□□□ 0.91
HLA-DRAP01903 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DRAP01903 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DRAP01903 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
HLA-DRAP01903 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DRAP01903 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DRAP01903 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DRAP01903 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DRAP01903 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DRAP01903 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DRAP01903 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DRAP01903 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DRAP01903 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.72■□□□□ 0.91
HLA-DRAP01903 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DRAP01903 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DRAP01903 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DRAP01903 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DRAP01903 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DRAP01903 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DRAP01903 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
HLA-DRAP01903 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DRAP01903 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.72■□□□□ 0.91
HLA-DRAP01903 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.72■□□□□ 0.91
HLA-DRAP01903 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.72■□□□□ 0.91
HLA-DRAP01903 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.72■□□□□ 0.91
HLA-DRAP01903 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DRAP01903 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DRAP01903 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DRAP01903 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DRAP01903 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.72■□□□□ 0.91
HLA-DRAP01903 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DRAP01903 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.71■□□□□ 0.91
HLA-DRAP01903 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-DRAP01903 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
HLA-DRAP01903 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.71■□□□□ 0.91
HLA-DRAP01903 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.71■□□□□ 0.91
HLA-DRAP01903 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.71■□□□□ 0.91
HLA-DRAP01903 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.71■□□□□ 0.91
HLA-DRAP01903 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
HLA-DRAP01903 AP006294.2-201ENST00000641667 209 ntBASIC20.71■□□□□ 0.91
HLA-DRAP01903 AL031985.4-201ENST00000642138 673 ntBASIC20.71■□□□□ 0.91
HLA-DRAP01903 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-DRAP01903 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-DRAP01903 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
HLA-DRAP01903 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
HLA-DRAP01903 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-DRAP01903 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.71■□□□□ 0.91
HLA-DRAP01903 AC141586.3-201ENST00000562166 1838 ntBASIC20.71■□□□□ 0.91
HLA-DRAP01903 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-DRAP01903 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-DRAP01903 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-DRAP01903 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-DRAP01903 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.71■□□□□ 0.91
HLA-DRAP01903 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
HLA-DRAP01903 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.7■□□□□ 0.91
HLA-DRAP01903 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms