Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC16.12■□□□□ 0.17
SIX6O95475 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIX6O95475 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SIX6O95475 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIX6O95475 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SIX6O95475 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIX6O95475 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SIX6O95475 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIX6O95475 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.12■□□□□ 0.17
SIX6O95475 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SIX6O95475 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIX6O95475 PTBP1P-201ENST00000554374 1601 ntBASIC16.12■□□□□ 0.17
SIX6O95475 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.12■□□□□ 0.17
SIX6O95475 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.12■□□□□ 0.17
SIX6O95475 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SIX6O95475 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SIX6O95475 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIX6O95475 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.11■□□□□ 0.17
SIX6O95475 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIX6O95475 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIX6O95475 AC008894.3-201ENST00000624324 3103 ntBASIC16.11■□□□□ 0.17
SIX6O95475 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SIX6O95475 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
SIX6O95475 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIX6O95475 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.11■□□□□ 0.17
SIX6O95475 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIX6O95475 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SIX6O95475 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC16.11■□□□□ 0.17
SIX6O95475 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
SIX6O95475 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SIX6O95475 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SIX6O95475 AC233992.3-201ENST00000607491 485 ntBASIC16.11■□□□□ 0.17
SIX6O95475 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIX6O95475 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
SIX6O95475 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIX6O95475 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
SIX6O95475 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIX6O95475 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SIX6O95475 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.11■□□□□ 0.17
SIX6O95475 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIX6O95475 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.11■□□□□ 0.17
SIX6O95475 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIX6O95475 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SIX6O95475 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SIX6O95475 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIX6O95475 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SIX6O95475 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIX6O95475 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SIX6O95475 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.1■□□□□ 0.17
SIX6O95475 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIX6O95475 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIX6O95475 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.1■□□□□ 0.17
SIX6O95475 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.1■□□□□ 0.17
SIX6O95475 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.1■□□□□ 0.17
SIX6O95475 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SIX6O95475 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIX6O95475 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SIX6O95475 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIX6O95475 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SIX6O95475 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIX6O95475 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SIX6O95475 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIX6O95475 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
SIX6O95475 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIX6O95475 AC091799.1-201ENST00000422823 811 ntBASIC16.1■□□□□ 0.17
SIX6O95475 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.1■□□□□ 0.17
SIX6O95475 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC16.1■□□□□ 0.17
SIX6O95475 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIX6O95475 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.1■□□□□ 0.17
SIX6O95475 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SIX6O95475 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIX6O95475 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SIX6O95475 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIX6O95475 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.1■□□□□ 0.17
SIX6O95475 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SIX6O95475 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SIX6O95475 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.1■□□□□ 0.17
SIX6O95475 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SIX6O95475 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIX6O95475 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SIX6O95475 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIX6O95475 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SIX6O95475 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SIX6O95475 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
SIX6O95475 MKRN4P-201ENST00000444706 1521 ntBASIC16.09■□□□□ 0.17
SIX6O95475 PKD1P1-201ENST00000458669 6805 ntBASIC16.09■□□□□ 0.17
SIX6O95475 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SIX6O95475 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SIX6O95475 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SIX6O95475 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SIX6O95475 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
SIX6O95475 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SIX6O95475 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.09■□□□□ 0.17
SIX6O95475 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SIX6O95475 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SIX6O95475 SERP1-208ENST00000491660 830 ntTSL 2 BASIC16.09■□□□□ 0.17
SIX6O95475 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SIX6O95475 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.09■□□□□ 0.17
SIX6O95475 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SIX6O95475 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms