Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.36■□□□□ 0.69
VAPBO95292 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.36■□□□□ 0.69
VAPBO95292 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VAPBO95292 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.36■□□□□ 0.69
VAPBO95292 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VAPBO95292 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
VAPBO95292 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.36■□□□□ 0.69
VAPBO95292 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.36■□□□□ 0.69
VAPBO95292 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.36■□□□□ 0.69
VAPBO95292 KRT18P6-201ENST00000555540 1265 ntBASIC19.36■□□□□ 0.69
VAPBO95292 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
VAPBO95292 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VAPBO95292 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
VAPBO95292 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VAPBO95292 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.36■□□□□ 0.69
VAPBO95292 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VAPBO95292 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
VAPBO95292 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.36■□□□□ 0.69
VAPBO95292 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VAPBO95292 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
VAPBO95292 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VAPBO95292 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
VAPBO95292 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.35■□□□□ 0.69
VAPBO95292 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VAPBO95292 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
VAPBO95292 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VAPBO95292 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.35■□□□□ 0.69
VAPBO95292 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
VAPBO95292 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
VAPBO95292 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VAPBO95292 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.35■□□□□ 0.69
VAPBO95292 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
VAPBO95292 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.35■□□□□ 0.69
VAPBO95292 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.35■□□□□ 0.69
VAPBO95292 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VAPBO95292 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VAPBO95292 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VAPBO95292 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
VAPBO95292 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VAPBO95292 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VAPBO95292 AC233263.1-201ENST00000578059 224 ntBASIC19.35■□□□□ 0.69
VAPBO95292 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.35■□□□□ 0.69
VAPBO95292 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.35■□□□□ 0.69
VAPBO95292 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
VAPBO95292 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VAPBO95292 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VAPBO95292 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
VAPBO95292 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VAPBO95292 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
VAPBO95292 AL049812.1-201ENST00000432563 2267 ntBASIC19.35■□□□□ 0.69
VAPBO95292 NBPF21P-201ENST00000425093 1451 ntBASIC19.35■□□□□ 0.69
VAPBO95292 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VAPBO95292 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.35■□□□□ 0.69
VAPBO95292 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VAPBO95292 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
VAPBO95292 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VAPBO95292 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
VAPBO95292 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
VAPBO95292 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.34■□□□□ 0.69
VAPBO95292 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
VAPBO95292 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VAPBO95292 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
VAPBO95292 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
VAPBO95292 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.34■□□□□ 0.69
VAPBO95292 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VAPBO95292 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VAPBO95292 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VAPBO95292 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VAPBO95292 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.34■□□□□ 0.69
VAPBO95292 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.34■□□□□ 0.69
VAPBO95292 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.34■□□□□ 0.69
VAPBO95292 MTDHP1-201ENST00000605323 784 ntBASIC19.34■□□□□ 0.69
VAPBO95292 AC069544.1-201ENST00000609399 999 ntBASIC19.34■□□□□ 0.69
VAPBO95292 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VAPBO95292 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VAPBO95292 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.34■□□□□ 0.69
VAPBO95292 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VAPBO95292 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.34■□□□□ 0.69
VAPBO95292 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VAPBO95292 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.34■□□□□ 0.69
VAPBO95292 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.34■□□□□ 0.69
VAPBO95292 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VAPBO95292 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VAPBO95292 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
VAPBO95292 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.33■□□□□ 0.69
VAPBO95292 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
VAPBO95292 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
VAPBO95292 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
VAPBO95292 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
VAPBO95292 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.33■□□□□ 0.69
VAPBO95292 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
VAPBO95292 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.33■□□□□ 0.68
VAPBO95292 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.33■□□□□ 0.68
VAPBO95292 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.33■□□□□ 0.68
VAPBO95292 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.33■□□□□ 0.68
VAPBO95292 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
VAPBO95292 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
VAPBO95292 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.33■□□□□ 0.68
VAPBO95292 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
VAPBO95292 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms