Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CSPG5O95196 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.68■□□□□ 0.9
CSPG5O95196 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.68■□□□□ 0.9
CSPG5O95196 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CSPG5O95196 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CSPG5O95196 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CSPG5O95196 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSPG5O95196 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CSPG5O95196 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CSPG5O95196 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CSPG5O95196 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.68■□□□□ 0.9
CSPG5O95196 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CSPG5O95196 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSPG5O95196 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
CSPG5O95196 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CSPG5O95196 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CSPG5O95196 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSPG5O95196 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CSPG5O95196 AL450487.1-201ENST00000426799 995 ntBASIC20.67■□□□□ 0.9
CSPG5O95196 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.67■□□□□ 0.9
CSPG5O95196 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.67■□□□□ 0.9
CSPG5O95196 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.67■□□□□ 0.9
CSPG5O95196 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.67■□□□□ 0.9
CSPG5O95196 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.67■□□□□ 0.9
CSPG5O95196 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.67■□□□□ 0.9
CSPG5O95196 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.67■□□□□ 0.9
CSPG5O95196 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.67■□□□□ 0.9
CSPG5O95196 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.67■□□□□ 0.9
CSPG5O95196 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSPG5O95196 KRT8P45-201ENST00000414328 1447 ntBASIC20.67■□□□□ 0.9
CSPG5O95196 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.67■□□□□ 0.9
CSPG5O95196 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CSPG5O95196 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSPG5O95196 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSPG5O95196 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.67■□□□□ 0.9
CSPG5O95196 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSPG5O95196 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CSPG5O95196 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSPG5O95196 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSPG5O95196 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSPG5O95196 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSPG5O95196 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSPG5O95196 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CSPG5O95196 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CSPG5O95196 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CSPG5O95196 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CSPG5O95196 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CSPG5O95196 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CSPG5O95196 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CSPG5O95196 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CSPG5O95196 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CSPG5O95196 VENTXP5-201ENST00000523979 775 ntBASIC20.66■□□□□ 0.9
CSPG5O95196 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.66■□□□□ 0.9
CSPG5O95196 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.66■□□□□ 0.9
CSPG5O95196 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CSPG5O95196 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.66■□□□□ 0.9
CSPG5O95196 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CSPG5O95196 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.65■□□□□ 0.9
CSPG5O95196 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CSPG5O95196 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CSPG5O95196 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CSPG5O95196 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.65■□□□□ 0.9
CSPG5O95196 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.65■□□□□ 0.9
CSPG5O95196 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.65■□□□□ 0.9
CSPG5O95196 AP003041.3-201ENST00000527151 707 ntBASIC20.65■□□□□ 0.9
CSPG5O95196 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CSPG5O95196 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CSPG5O95196 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.65■□□□□ 0.9
CSPG5O95196 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.65■□□□□ 0.9
CSPG5O95196 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.65■□□□□ 0.9
CSPG5O95196 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.65■□□□□ 0.9
CSPG5O95196 AL023803.3-201ENST00000615559 522 ntBASIC20.65■□□□□ 0.9
CSPG5O95196 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CSPG5O95196 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CSPG5O95196 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CSPG5O95196 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CSPG5O95196 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CSPG5O95196 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CSPG5O95196 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CSPG5O95196 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.64■□□□□ 0.89
CSPG5O95196 TSPY17P-201ENST00000450329 467 ntBASIC20.64■□□□□ 0.89
CSPG5O95196 HOMER2P1-201ENST00000455653 964 ntBASIC20.64■□□□□ 0.89
CSPG5O95196 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.64■□□□□ 0.89
CSPG5O95196 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.64■□□□□ 0.89
CSPG5O95196 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.64■□□□□ 0.89
CSPG5O95196 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.64■□□□□ 0.89
CSPG5O95196 AL353719.1-201ENST00000566847 864 ntBASIC20.64■□□□□ 0.89
CSPG5O95196 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CSPG5O95196 AC069148.1-201ENST00000608741 768 ntBASIC20.64■□□□□ 0.89
CSPG5O95196 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.64■□□□□ 0.89
CSPG5O95196 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
CSPG5O95196 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.64■□□□□ 0.89
CSPG5O95196 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.64■□□□□ 0.89
CSPG5O95196 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.64■□□□□ 0.89
CSPG5O95196 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CSPG5O95196 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CSPG5O95196 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CSPG5O95196 KRT8P8-201ENST00000434750 1448 ntBASIC20.63■□□□□ 0.89
CSPG5O95196 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CSPG5O95196 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms