Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
PCF11O94913 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
PCF11O94913 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC30.1■■■□□ 2.41
PCF11O94913 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
PCF11O94913 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC30.1■■■□□ 2.41
PCF11O94913 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC30.1■■■□□ 2.41
PCF11O94913 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC30.1■■■□□ 2.41
PCF11O94913 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
PCF11O94913 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
PCF11O94913 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
PCF11O94913 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC30.1■■■□□ 2.41
PCF11O94913 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC30.1■■■□□ 2.41
PCF11O94913 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
PCF11O94913 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
PCF11O94913 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC30.1■■■□□ 2.41
PCF11O94913 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC30.1■■■□□ 2.41
PCF11O94913 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
PCF11O94913 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
PCF11O94913 MED17-221ENST00000639724 2317 ntTSL 5 BASIC30.09■■■□□ 2.41
PCF11O94913 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
PCF11O94913 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
PCF11O94913 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC30.09■■■□□ 2.41
PCF11O94913 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
PCF11O94913 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
PCF11O94913 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
PCF11O94913 Telomerase-vert.1-201ENST00000363312 438 ntBASIC30.09■■■□□ 2.41
PCF11O94913 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC30.09■■■□□ 2.41
PCF11O94913 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC30.09■■■□□ 2.41
PCF11O94913 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC30.09■■■□□ 2.41
PCF11O94913 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
PCF11O94913 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
PCF11O94913 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC30.09■■■□□ 2.41
PCF11O94913 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC30.09■■■□□ 2.41
PCF11O94913 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC30.09■■■□□ 2.41
PCF11O94913 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC30.09■■■□□ 2.41
PCF11O94913 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC30.09■■■□□ 2.41
PCF11O94913 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
PCF11O94913 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
PCF11O94913 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC30.08■■■□□ 2.41
PCF11O94913 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC30.08■■■□□ 2.41
PCF11O94913 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
PCF11O94913 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
PCF11O94913 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC30.08■■■□□ 2.41
PCF11O94913 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC30.08■■■□□ 2.41
PCF11O94913 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
PCF11O94913 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC30.08■■■□□ 2.41
PCF11O94913 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC30.08■■■□□ 2.41
PCF11O94913 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
PCF11O94913 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC30.08■■■□□ 2.41
PCF11O94913 AC112907.3-201ENST00000577781 2400 ntBASIC30.07■■■□□ 2.41
PCF11O94913 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
PCF11O94913 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
PCF11O94913 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC30.07■■■□□ 2.4
PCF11O94913 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC30.07■■■□□ 2.4
PCF11O94913 AL671277.2-201ENST00000458060 996 ntBASIC30.07■■■□□ 2.4
PCF11O94913 CD81-212ENST00000526072 1172 ntTSL 5 BASIC30.07■■■□□ 2.4
PCF11O94913 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC30.07■■■□□ 2.4
PCF11O94913 NEK4P2-201ENST00000580004 1012 ntBASIC30.07■■■□□ 2.4
PCF11O94913 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC30.07■■■□□ 2.4
PCF11O94913 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC30.07■■■□□ 2.4
PCF11O94913 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
PCF11O94913 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
PCF11O94913 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
PCF11O94913 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
PCF11O94913 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC30.07■■■□□ 2.4
PCF11O94913 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
PCF11O94913 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
PCF11O94913 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
PCF11O94913 AC005332.1-201ENST00000577698 1310 ntBASIC30.07■■■□□ 2.4
PCF11O94913 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
PCF11O94913 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
PCF11O94913 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC30.07■■■□□ 2.4
PCF11O94913 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
PCF11O94913 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC30.07■■■□□ 2.4
PCF11O94913 SPDYE13P-201ENST00000445314 798 ntBASIC30.07■■■□□ 2.4
PCF11O94913 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
PCF11O94913 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
PCF11O94913 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC30.07■■■□□ 2.4
PCF11O94913 AC023511.2-201ENST00000618803 211 ntBASIC30.07■■■□□ 2.4
PCF11O94913 CR769767.2-201ENST00000622735 460 ntBASIC30.07■■■□□ 2.4
PCF11O94913 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
PCF11O94913 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC30.06■■■□□ 2.4
PCF11O94913 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC30.06■■■□□ 2.4
PCF11O94913 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC30.06■■■□□ 2.4
PCF11O94913 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC30.06■■■□□ 2.4
PCF11O94913 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC30.06■■■□□ 2.4
PCF11O94913 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC30.06■■■□□ 2.4
PCF11O94913 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC30.06■■■□□ 2.4
PCF11O94913 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC30.06■■■□□ 2.4
PCF11O94913 AL121956.5-201ENST00000625261 221 ntBASIC30.06■■■□□ 2.4
PCF11O94913 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
PCF11O94913 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC30.06■■■□□ 2.4
PCF11O94913 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
PCF11O94913 GAS2L1P1-201ENST00000420145 1480 ntBASIC30.05■■■□□ 2.4
PCF11O94913 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
PCF11O94913 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
PCF11O94913 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
PCF11O94913 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC30.05■■■□□ 2.4
PCF11O94913 TSPY21P-201ENST00000433481 731 ntBASIC30.05■■■□□ 2.4
PCF11O94913 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC30.05■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms