Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
BRD4O60885 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
BRD4O60885 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
BRD4O60885 GPX4-207ENST00000589115 812 ntTSL 2 BASIC26.7■■□□□ 1.86
BRD4O60885 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC26.7■■□□□ 1.86
BRD4O60885 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC26.7■■□□□ 1.86
BRD4O60885 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC26.69■■□□□ 1.86
BRD4O60885 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
BRD4O60885 POLI-202ENST00000406285 2030 ntTSL 2 BASIC26.69■■□□□ 1.86
BRD4O60885 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
BRD4O60885 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC26.69■■□□□ 1.86
BRD4O60885 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC26.69■■□□□ 1.86
BRD4O60885 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC26.69■■□□□ 1.86
BRD4O60885 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
BRD4O60885 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
BRD4O60885 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC26.69■■□□□ 1.86
BRD4O60885 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
BRD4O60885 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC26.69■■□□□ 1.86
BRD4O60885 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC26.69■■□□□ 1.86
BRD4O60885 AC117947.1-201ENST00000427448 529 ntBASIC26.69■■□□□ 1.86
BRD4O60885 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC26.69■■□□□ 1.86
BRD4O60885 AC091390.4-202ENST00000476426 537 ntBASIC26.69■■□□□ 1.86
BRD4O60885 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC26.69■■□□□ 1.86
BRD4O60885 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC26.69■■□□□ 1.86
BRD4O60885 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
BRD4O60885 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
BRD4O60885 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
BRD4O60885 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
BRD4O60885 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
BRD4O60885 AC092338.2-201ENST00000568827 1415 ntBASIC26.68■■□□□ 1.86
BRD4O60885 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC26.68■■□□□ 1.86
BRD4O60885 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
BRD4O60885 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
BRD4O60885 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
BRD4O60885 HIST1H2APS4-201ENST00000362070 348 ntBASIC26.68■■□□□ 1.86
BRD4O60885 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
BRD4O60885 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC26.68■■□□□ 1.86
BRD4O60885 AL023803.3-201ENST00000615559 522 ntBASIC26.68■■□□□ 1.86
BRD4O60885 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC26.68■■□□□ 1.86
BRD4O60885 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
BRD4O60885 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
BRD4O60885 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
BRD4O60885 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC26.67■■□□□ 1.86
BRD4O60885 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
BRD4O60885 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
BRD4O60885 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC26.67■■□□□ 1.86
BRD4O60885 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC26.67■■□□□ 1.86
BRD4O60885 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC26.67■■□□□ 1.86
BRD4O60885 CA15P1-201ENST00000481698 905 ntBASIC26.67■■□□□ 1.86
BRD4O60885 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC26.67■■□□□ 1.86
BRD4O60885 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
BRD4O60885 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
BRD4O60885 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
BRD4O60885 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
BRD4O60885 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC26.67■■□□□ 1.86
BRD4O60885 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
BRD4O60885 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
BRD4O60885 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC26.66■■□□□ 1.86
BRD4O60885 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
BRD4O60885 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
BRD4O60885 AC007663.1-201ENST00000438948 1240 ntBASIC26.66■■□□□ 1.86
BRD4O60885 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC26.66■■□□□ 1.86
BRD4O60885 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
BRD4O60885 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC26.66■■□□□ 1.86
BRD4O60885 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC26.66■■□□□ 1.86
BRD4O60885 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC26.66■■□□□ 1.86
BRD4O60885 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
BRD4O60885 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
BRD4O60885 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
BRD4O60885 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC26.65■■□□□ 1.86
BRD4O60885 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
BRD4O60885 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
BRD4O60885 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC26.65■■□□□ 1.86
BRD4O60885 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC26.65■■□□□ 1.86
BRD4O60885 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC26.65■■□□□ 1.86
BRD4O60885 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
BRD4O60885 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC26.65■■□□□ 1.86
BRD4O60885 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
BRD4O60885 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC26.65■■□□□ 1.86
BRD4O60885 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
BRD4O60885 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
BRD4O60885 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
BRD4O60885 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC26.65■■□□□ 1.86
BRD4O60885 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
BRD4O60885 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
BRD4O60885 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC26.64■■□□□ 1.86
BRD4O60885 DERL1-203ENST00000419562 918 ntTSL 2 BASIC26.64■■□□□ 1.86
BRD4O60885 SAPCD2P2-201ENST00000431719 1174 ntBASIC26.64■■□□□ 1.86
BRD4O60885 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC26.64■■□□□ 1.86
BRD4O60885 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC26.64■■□□□ 1.86
BRD4O60885 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC26.64■■□□□ 1.86
BRD4O60885 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC26.64■■□□□ 1.86
BRD4O60885 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
BRD4O60885 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
BRD4O60885 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
BRD4O60885 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.85
BRD4O60885 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC26.64■■□□□ 1.85
BRD4O60885 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
BRD4O60885 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC26.64■■□□□ 1.85
BRD4O60885 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms