Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.94■□□□□ 0.46
PRKNO60260 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRKNO60260 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.94■□□□□ 0.46
PRKNO60260 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PRKNO60260 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PRKNO60260 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRKNO60260 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRKNO60260 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PRKNO60260 B3GAT3P1-201ENST00000471720 806 ntBASIC17.94■□□□□ 0.46
PRKNO60260 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.94■□□□□ 0.46
PRKNO60260 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.94■□□□□ 0.46
PRKNO60260 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.94■□□□□ 0.46
PRKNO60260 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.94■□□□□ 0.46
PRKNO60260 MIR6786-201ENST00000616843 113 ntBASIC17.94■□□□□ 0.46
PRKNO60260 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRKNO60260 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.94■□□□□ 0.46
PRKNO60260 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PRKNO60260 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRKNO60260 AC093484.2-201ENST00000580996 2166 ntBASIC17.94■□□□□ 0.46
PRKNO60260 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.94■□□□□ 0.46
PRKNO60260 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PRKNO60260 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRKNO60260 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
PRKNO60260 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PRKNO60260 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PRKNO60260 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRKNO60260 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.93■□□□□ 0.46
PRKNO60260 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.93■□□□□ 0.46
PRKNO60260 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRKNO60260 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PRKNO60260 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRKNO60260 AC008040.2-201ENST00000461049 708 ntBASIC17.93■□□□□ 0.46
PRKNO60260 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PRKNO60260 Z85996.1-201ENST00000494644 937 ntBASIC17.93■□□□□ 0.46
PRKNO60260 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.93■□□□□ 0.46
PRKNO60260 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.93■□□□□ 0.46
PRKNO60260 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PRKNO60260 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.93■□□□□ 0.46
PRKNO60260 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRKNO60260 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRKNO60260 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRKNO60260 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.93■□□□□ 0.46
PRKNO60260 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
PRKNO60260 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRKNO60260 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRKNO60260 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRKNO60260 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.93■□□□□ 0.46
PRKNO60260 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRKNO60260 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRKNO60260 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRKNO60260 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.92■□□□□ 0.46
PRKNO60260 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
PRKNO60260 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRKNO60260 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRKNO60260 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRKNO60260 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRKNO60260 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.92■□□□□ 0.46
PRKNO60260 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.92■□□□□ 0.46
PRKNO60260 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
PRKNO60260 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PRKNO60260 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.92■□□□□ 0.46
PRKNO60260 AL160286.2-201ENST00000567150 934 ntBASIC17.92■□□□□ 0.46
PRKNO60260 AC026271.3-201ENST00000571884 352 ntBASIC17.92■□□□□ 0.46
PRKNO60260 AP000525.1-201ENST00000608286 694 ntBASIC17.92■□□□□ 0.46
PRKNO60260 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PRKNO60260 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.92■□□□□ 0.46
PRKNO60260 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRKNO60260 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.92■□□□□ 0.46
PRKNO60260 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRKNO60260 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRKNO60260 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
PRKNO60260 RCC2P6-201ENST00000526625 1557 ntBASIC17.91■□□□□ 0.46
PRKNO60260 AC104417.2-201ENST00000562989 1793 ntBASIC17.91■□□□□ 0.46
PRKNO60260 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.91■□□□□ 0.46
PRKNO60260 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRKNO60260 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRKNO60260 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PRKNO60260 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRKNO60260 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRKNO60260 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRKNO60260 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.91■□□□□ 0.46
PRKNO60260 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.91■□□□□ 0.46
PRKNO60260 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.91■□□□□ 0.46
PRKNO60260 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PRKNO60260 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.91■□□□□ 0.46
PRKNO60260 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
PRKNO60260 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.91■□□□□ 0.46
PRKNO60260 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.91■□□□□ 0.46
PRKNO60260 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRKNO60260 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PRKNO60260 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.91■□□□□ 0.46
PRKNO60260 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.91■□□□□ 0.46
PRKNO60260 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.91■□□□□ 0.46
PRKNO60260 AC073912.3-201ENST00000624414 853 ntBASIC17.91■□□□□ 0.46
PRKNO60260 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PRKNO60260 ZNF815P-204ENST00000434898 1737 ntBASIC17.91■□□□□ 0.46
PRKNO60260 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRKNO60260 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.91■□□□□ 0.46
PRKNO60260 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRKNO60260 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms