Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSNA1O43805 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
SSNA1O43805 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSNA1O43805 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSNA1O43805 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSNA1O43805 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSNA1O43805 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SSNA1O43805 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.41■□□□□ 0.22
SSNA1O43805 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC16.41■□□□□ 0.22
SSNA1O43805 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SSNA1O43805 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.41■□□□□ 0.22
SSNA1O43805 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSNA1O43805 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SSNA1O43805 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSNA1O43805 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SSNA1O43805 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSNA1O43805 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SSNA1O43805 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.41■□□□□ 0.22
SSNA1O43805 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SSNA1O43805 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSNA1O43805 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SSNA1O43805 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SSNA1O43805 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SSNA1O43805 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSNA1O43805 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SSNA1O43805 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSNA1O43805 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSNA1O43805 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SSNA1O43805 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.4■□□□□ 0.22
SSNA1O43805 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSNA1O43805 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SSNA1O43805 AP001271.2-201ENST00000624018 1556 ntBASIC16.4■□□□□ 0.22
SSNA1O43805 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSNA1O43805 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SSNA1O43805 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSNA1O43805 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SSNA1O43805 SRD5A1P1-201ENST00000442297 786 ntBASIC16.4■□□□□ 0.22
SSNA1O43805 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC16.4■□□□□ 0.22
SSNA1O43805 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC16.4■□□□□ 0.22
SSNA1O43805 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SSNA1O43805 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SSNA1O43805 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.4■□□□□ 0.22
SSNA1O43805 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSNA1O43805 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.4■□□□□ 0.22
SSNA1O43805 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SSNA1O43805 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SSNA1O43805 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.4■□□□□ 0.22
SSNA1O43805 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSNA1O43805 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.4■□□□□ 0.22
SSNA1O43805 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SSNA1O43805 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
SSNA1O43805 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SSNA1O43805 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SSNA1O43805 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SSNA1O43805 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.22
SSNA1O43805 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
SSNA1O43805 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.39■□□□□ 0.22
SSNA1O43805 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SSNA1O43805 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SSNA1O43805 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SSNA1O43805 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.39■□□□□ 0.21
SSNA1O43805 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SSNA1O43805 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SSNA1O43805 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SSNA1O43805 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.39■□□□□ 0.21
SSNA1O43805 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.39■□□□□ 0.21
SSNA1O43805 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SSNA1O43805 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
SSNA1O43805 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC16.39■□□□□ 0.21
SSNA1O43805 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SSNA1O43805 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.39■□□□□ 0.21
SSNA1O43805 AC009053.2-201ENST00000563701 2365 ntBASIC16.39■□□□□ 0.21
SSNA1O43805 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SSNA1O43805 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.39■□□□□ 0.21
SSNA1O43805 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
SSNA1O43805 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SSNA1O43805 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
SSNA1O43805 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.39■□□□□ 0.21
SSNA1O43805 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SSNA1O43805 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SSNA1O43805 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SSNA1O43805 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SSNA1O43805 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SSNA1O43805 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SSNA1O43805 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SSNA1O43805 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SSNA1O43805 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SSNA1O43805 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SSNA1O43805 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
SSNA1O43805 AC141586.3-201ENST00000562166 1838 ntBASIC16.38■□□□□ 0.21
SSNA1O43805 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SSNA1O43805 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SSNA1O43805 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SSNA1O43805 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
SSNA1O43805 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SSNA1O43805 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SSNA1O43805 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SSNA1O43805 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SSNA1O43805 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
SSNA1O43805 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms