Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SMAD6O43541 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.5■□□□□ 0.71
SMAD6O43541 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.5■□□□□ 0.71
SMAD6O43541 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMAD6O43541 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.5■□□□□ 0.71
SMAD6O43541 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.5■□□□□ 0.71
SMAD6O43541 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
SMAD6O43541 KRT8P11-201ENST00000409686 1436 ntBASIC19.5■□□□□ 0.71
SMAD6O43541 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SMAD6O43541 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMAD6O43541 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.5■□□□□ 0.71
SMAD6O43541 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMAD6O43541 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMAD6O43541 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.49■□□□□ 0.71
SMAD6O43541 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.49■□□□□ 0.71
SMAD6O43541 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMAD6O43541 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.49■□□□□ 0.71
SMAD6O43541 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMAD6O43541 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMAD6O43541 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.49■□□□□ 0.71
SMAD6O43541 LINC01568-207ENST00000641790 1380 ntBASIC19.49■□□□□ 0.71
SMAD6O43541 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SMAD6O43541 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMAD6O43541 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.49■□□□□ 0.71
SMAD6O43541 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.49■□□□□ 0.71
SMAD6O43541 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SMAD6O43541 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.49■□□□□ 0.71
SMAD6O43541 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SMAD6O43541 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.49■□□□□ 0.71
SMAD6O43541 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SMAD6O43541 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.49■□□□□ 0.71
SMAD6O43541 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.49■□□□□ 0.71
SMAD6O43541 AC145285.6-201ENST00000604632 637 ntBASIC19.49■□□□□ 0.71
SMAD6O43541 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMAD6O43541 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.49■□□□□ 0.71
SMAD6O43541 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.49■□□□□ 0.71
SMAD6O43541 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMAD6O43541 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMAD6O43541 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMAD6O43541 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.49■□□□□ 0.71
SMAD6O43541 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMAD6O43541 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMAD6O43541 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.48■□□□□ 0.71
SMAD6O43541 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SMAD6O43541 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SMAD6O43541 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SMAD6O43541 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SMAD6O43541 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMAD6O43541 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMAD6O43541 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.48■□□□□ 0.71
SMAD6O43541 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMAD6O43541 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.48■□□□□ 0.71
SMAD6O43541 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SMAD6O43541 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMAD6O43541 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SMAD6O43541 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.48■□□□□ 0.71
SMAD6O43541 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMAD6O43541 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SMAD6O43541 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SMAD6O43541 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.48■□□□□ 0.71
SMAD6O43541 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMAD6O43541 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMAD6O43541 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMAD6O43541 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMAD6O43541 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMAD6O43541 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SMAD6O43541 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMAD6O43541 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMAD6O43541 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.47■□□□□ 0.71
SMAD6O43541 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SMAD6O43541 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SMAD6O43541 INGX-201ENST00000359239 846 ntBASIC19.47■□□□□ 0.71
SMAD6O43541 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.47■□□□□ 0.71
SMAD6O43541 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMAD6O43541 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.47■□□□□ 0.71
SMAD6O43541 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.47■□□□□ 0.71
SMAD6O43541 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMAD6O43541 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SMAD6O43541 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.47■□□□□ 0.71
SMAD6O43541 CKBP1-201ENST00000565489 1086 ntBASIC19.47■□□□□ 0.71
SMAD6O43541 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.47■□□□□ 0.71
SMAD6O43541 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.47■□□□□ 0.71
SMAD6O43541 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.47■□□□□ 0.71
SMAD6O43541 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMAD6O43541 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SMAD6O43541 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMAD6O43541 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SMAD6O43541 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.47■□□□□ 0.71
SMAD6O43541 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SMAD6O43541 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMAD6O43541 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.46■□□□□ 0.71
SMAD6O43541 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMAD6O43541 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SMAD6O43541 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
SMAD6O43541 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
SMAD6O43541 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.46■□□□□ 0.71
SMAD6O43541 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMAD6O43541 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.46■□□□□ 0.71
SMAD6O43541 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.46■□□□□ 0.71
SMAD6O43541 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms