Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
CHD2O14647 PNN-202ENST00000553331 656 ntTSL 3 BASIC26.89■■□□□ 1.9
CHD2O14647 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
CHD2O14647 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CHD2O14647 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.89
CHD2O14647 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.89
CHD2O14647 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CHD2O14647 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CHD2O14647 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CHD2O14647 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
CHD2O14647 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC26.88■■□□□ 1.89
CHD2O14647 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC26.88■■□□□ 1.89
CHD2O14647 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CHD2O14647 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC26.88■■□□□ 1.89
CHD2O14647 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC26.88■■□□□ 1.89
CHD2O14647 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CHD2O14647 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC26.88■■□□□ 1.89
CHD2O14647 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC26.88■■□□□ 1.89
CHD2O14647 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC26.88■■□□□ 1.89
CHD2O14647 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC26.88■■□□□ 1.89
CHD2O14647 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC26.88■■□□□ 1.89
CHD2O14647 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC26.88■■□□□ 1.89
CHD2O14647 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
CHD2O14647 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC26.87■■□□□ 1.89
CHD2O14647 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CHD2O14647 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CHD2O14647 AC133561.1-201ENST00000568600 2415 ntBASIC26.87■■□□□ 1.89
CHD2O14647 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC26.87■■□□□ 1.89
CHD2O14647 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
CHD2O14647 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC26.87■■□□□ 1.89
CHD2O14647 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
CHD2O14647 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC26.87■■□□□ 1.89
CHD2O14647 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CHD2O14647 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CHD2O14647 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC26.86■■□□□ 1.89
CHD2O14647 HLA-A-201ENST00000376802 1334 ntBASIC26.86■■□□□ 1.89
CHD2O14647 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC26.86■■□□□ 1.89
CHD2O14647 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CHD2O14647 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC26.86■■□□□ 1.89
CHD2O14647 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
CHD2O14647 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC26.86■■□□□ 1.89
CHD2O14647 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CHD2O14647 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CHD2O14647 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
CHD2O14647 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC26.86■■□□□ 1.89
CHD2O14647 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CHD2O14647 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CHD2O14647 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
CHD2O14647 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC26.86■■□□□ 1.89
CHD2O14647 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC26.86■■□□□ 1.89
CHD2O14647 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC26.86■■□□□ 1.89
CHD2O14647 TOB2P1-201ENST00000469761 992 ntBASIC26.86■■□□□ 1.89
CHD2O14647 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC26.86■■□□□ 1.89
CHD2O14647 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC26.86■■□□□ 1.89
CHD2O14647 RNF126P1-202ENST00000569893 925 ntBASIC26.86■■□□□ 1.89
CHD2O14647 AL157888.1-201ENST00000631930 593 ntBASIC26.86■■□□□ 1.89
CHD2O14647 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC26.86■■□□□ 1.89
CHD2O14647 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CHD2O14647 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC26.85■■□□□ 1.89
CHD2O14647 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC26.85■■□□□ 1.89
CHD2O14647 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC26.85■■□□□ 1.89
CHD2O14647 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CHD2O14647 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CHD2O14647 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CHD2O14647 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
CHD2O14647 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CHD2O14647 KRT18P31-201ENST00000506277 1292 ntBASIC26.85■■□□□ 1.89
CHD2O14647 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC26.85■■□□□ 1.89
CHD2O14647 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC26.85■■□□□ 1.89
CHD2O14647 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CHD2O14647 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC26.85■■□□□ 1.89
CHD2O14647 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
CHD2O14647 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
CHD2O14647 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC26.84■■□□□ 1.89
CHD2O14647 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
CHD2O14647 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CHD2O14647 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC26.84■■□□□ 1.89
CHD2O14647 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC26.84■■□□□ 1.89
CHD2O14647 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CHD2O14647 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CHD2O14647 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC26.84■■□□□ 1.89
CHD2O14647 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CHD2O14647 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CHD2O14647 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CHD2O14647 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CHD2O14647 TSPY22P-201ENST00000427496 604 ntBASIC26.83■■□□□ 1.89
CHD2O14647 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC26.83■■□□□ 1.89
CHD2O14647 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CHD2O14647 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC26.83■■□□□ 1.89
CHD2O14647 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CHD2O14647 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
CHD2O14647 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
CHD2O14647 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC26.83■■□□□ 1.89
CHD2O14647 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CHD2O14647 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
CHD2O14647 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CHD2O14647 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
CHD2O14647 AL662844.1-201ENST00000546340 181 ntBASIC26.83■■□□□ 1.89
CHD2O14647 AC024243.1-201ENST00000609234 778 ntBASIC26.83■■□□□ 1.89
CHD2O14647 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms