Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.52■□□□□ 0.24
MEIS3P1A6NDR6 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.52■□□□□ 0.24
MEIS3P1A6NDR6 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.52■□□□□ 0.24
MEIS3P1A6NDR6 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
MEIS3P1A6NDR6 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.52■□□□□ 0.24
MEIS3P1A6NDR6 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.52■□□□□ 0.24
MEIS3P1A6NDR6 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
MEIS3P1A6NDR6 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MEIS3P1A6NDR6 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MEIS3P1A6NDR6 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MEIS3P1A6NDR6 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
MEIS3P1A6NDR6 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MEIS3P1A6NDR6 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MEIS3P1A6NDR6 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
MEIS3P1A6NDR6 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC16.52■□□□□ 0.24
MEIS3P1A6NDR6 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MEIS3P1A6NDR6 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.52■□□□□ 0.24
MEIS3P1A6NDR6 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.52■□□□□ 0.24
MEIS3P1A6NDR6 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MEIS3P1A6NDR6 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MEIS3P1A6NDR6 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
MEIS3P1A6NDR6 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
MEIS3P1A6NDR6 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MEIS3P1A6NDR6 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
MEIS3P1A6NDR6 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.52■□□□□ 0.23
MEIS3P1A6NDR6 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.23
MEIS3P1A6NDR6 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MEIS3P1A6NDR6 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MEIS3P1A6NDR6 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
MEIS3P1A6NDR6 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MEIS3P1A6NDR6 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MEIS3P1A6NDR6 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.51■□□□□ 0.23
MEIS3P1A6NDR6 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
MEIS3P1A6NDR6 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
MEIS3P1A6NDR6 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.51■□□□□ 0.23
MEIS3P1A6NDR6 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MEIS3P1A6NDR6 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MEIS3P1A6NDR6 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MEIS3P1A6NDR6 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
MEIS3P1A6NDR6 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MEIS3P1A6NDR6 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
MEIS3P1A6NDR6 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.51■□□□□ 0.23
MEIS3P1A6NDR6 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.51■□□□□ 0.23
MEIS3P1A6NDR6 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MEIS3P1A6NDR6 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.51■□□□□ 0.23
MEIS3P1A6NDR6 TERF1P5-201ENST00000477545 1207 ntBASIC16.51■□□□□ 0.23
MEIS3P1A6NDR6 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.51■□□□□ 0.23
MEIS3P1A6NDR6 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.51■□□□□ 0.23
MEIS3P1A6NDR6 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MEIS3P1A6NDR6 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC16.51■□□□□ 0.23
MEIS3P1A6NDR6 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC16.51■□□□□ 0.23
MEIS3P1A6NDR6 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
MEIS3P1A6NDR6 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.51■□□□□ 0.23
MEIS3P1A6NDR6 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MEIS3P1A6NDR6 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.51■□□□□ 0.23
MEIS3P1A6NDR6 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MEIS3P1A6NDR6 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
MEIS3P1A6NDR6 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
MEIS3P1A6NDR6 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.5■□□□□ 0.23
MEIS3P1A6NDR6 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MEIS3P1A6NDR6 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.5■□□□□ 0.23
MEIS3P1A6NDR6 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.5■□□□□ 0.23
MEIS3P1A6NDR6 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
MEIS3P1A6NDR6 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MEIS3P1A6NDR6 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
MEIS3P1A6NDR6 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MEIS3P1A6NDR6 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
MEIS3P1A6NDR6 AK1-201ENST00000223836 736 ntTSL 3 BASIC16.5■□□□□ 0.23
MEIS3P1A6NDR6 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MEIS3P1A6NDR6 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.5■□□□□ 0.23
MEIS3P1A6NDR6 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.5■□□□□ 0.23
MEIS3P1A6NDR6 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MEIS3P1A6NDR6 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.5■□□□□ 0.23
MEIS3P1A6NDR6 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
MEIS3P1A6NDR6 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MEIS3P1A6NDR6 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MEIS3P1A6NDR6 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MEIS3P1A6NDR6 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.5■□□□□ 0.23
MEIS3P1A6NDR6 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MEIS3P1A6NDR6 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
MEIS3P1A6NDR6 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
MEIS3P1A6NDR6 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
MEIS3P1A6NDR6 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MEIS3P1A6NDR6 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MEIS3P1A6NDR6 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.49■□□□□ 0.23
MEIS3P1A6NDR6 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
MEIS3P1A6NDR6 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.49■□□□□ 0.23
MEIS3P1A6NDR6 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MEIS3P1A6NDR6 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MEIS3P1A6NDR6 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MEIS3P1A6NDR6 AL031598.1-201ENST00000561511 1773 ntBASIC16.49■□□□□ 0.23
MEIS3P1A6NDR6 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.49■□□□□ 0.23
MEIS3P1A6NDR6 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MEIS3P1A6NDR6 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MEIS3P1A6NDR6 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MEIS3P1A6NDR6 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MEIS3P1A6NDR6 AC123595.1-201ENST00000440769 1046 ntBASIC16.49■□□□□ 0.23
MEIS3P1A6NDR6 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MEIS3P1A6NDR6 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MEIS3P1A6NDR6 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms