Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV10A0A0B4J240 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV10A0A0B4J240 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV10A0A0B4J240 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV10A0A0B4J240 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV10A0A0B4J240 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV10A0A0B4J240 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV10A0A0B4J240 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC13.6□□□□□ -0.23
TRAV10A0A0B4J240 ECEL1P2-202ENST00000465689 757 ntBASIC13.6□□□□□ -0.23
TRAV10A0A0B4J240 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC13.6□□□□□ -0.23
TRAV10A0A0B4J240 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV10A0A0B4J240 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV10A0A0B4J240 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC13.6□□□□□ -0.23
TRAV10A0A0B4J240 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC13.6□□□□□ -0.23
TRAV10A0A0B4J240 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV10A0A0B4J240 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV10A0A0B4J240 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV10A0A0B4J240 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV10A0A0B4J240 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV10A0A0B4J240 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV10A0A0B4J240 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV10A0A0B4J240 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV10A0A0B4J240 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV10A0A0B4J240 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
TRAV10A0A0B4J240 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
TRAV10A0A0B4J240 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV10A0A0B4J240 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV10A0A0B4J240 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV10A0A0B4J240 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV10A0A0B4J240 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV10A0A0B4J240 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV10A0A0B4J240 AL691432.2-201ENST00000607222 2038 ntBASIC13.59□□□□□ -0.23
TRAV10A0A0B4J240 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
TRAV10A0A0B4J240 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV10A0A0B4J240 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV10A0A0B4J240 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV10A0A0B4J240 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV10A0A0B4J240 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV10A0A0B4J240 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TRAV10A0A0B4J240 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV10A0A0B4J240 AL162377.1-201ENST00000618844 1793 ntBASIC13.59□□□□□ -0.23
TRAV10A0A0B4J240 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV10A0A0B4J240 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV10A0A0B4J240 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC13.59□□□□□ -0.23
TRAV10A0A0B4J240 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV10A0A0B4J240 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TRAV10A0A0B4J240 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV10A0A0B4J240 HMGA1P5-201ENST00000412453 271 ntBASIC13.59□□□□□ -0.23
TRAV10A0A0B4J240 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC13.59□□□□□ -0.23
TRAV10A0A0B4J240 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC13.59□□□□□ -0.23
TRAV10A0A0B4J240 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC13.59□□□□□ -0.23
TRAV10A0A0B4J240 RMI2-205ENST00000576027 818 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV10A0A0B4J240 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TRAV10A0A0B4J240 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV10A0A0B4J240 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
TRAV10A0A0B4J240 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV10A0A0B4J240 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV10A0A0B4J240 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV10A0A0B4J240 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV10A0A0B4J240 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC13.59□□□□□ -0.23
TRAV10A0A0B4J240 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV10A0A0B4J240 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC13.58□□□□□ -0.23
TRAV10A0A0B4J240 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
TRAV10A0A0B4J240 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
TRAV10A0A0B4J240 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV10A0A0B4J240 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV10A0A0B4J240 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV10A0A0B4J240 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV10A0A0B4J240 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV10A0A0B4J240 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV10A0A0B4J240 PRR31-201ENST00000371629 978 ntTSL 2 BASIC13.58□□□□□ -0.24
TRAV10A0A0B4J240 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC13.58□□□□□ -0.24
TRAV10A0A0B4J240 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV10A0A0B4J240 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV10A0A0B4J240 TSPY17P-201ENST00000450329 467 ntBASIC13.58□□□□□ -0.24
TRAV10A0A0B4J240 AC008040.2-201ENST00000461049 708 ntBASIC13.58□□□□□ -0.24
TRAV10A0A0B4J240 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC13.58□□□□□ -0.24
TRAV10A0A0B4J240 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
TRAV10A0A0B4J240 AL512604.3-201ENST00000569583 964 ntBASIC13.58□□□□□ -0.24
TRAV10A0A0B4J240 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC13.58□□□□□ -0.24
TRAV10A0A0B4J240 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
TRAV10A0A0B4J240 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC13.58□□□□□ -0.24
TRAV10A0A0B4J240 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC13.58□□□□□ -0.24
TRAV10A0A0B4J240 LGALS8-AS1-201ENST00000487567 1457 ntBASIC13.58□□□□□ -0.24
TRAV10A0A0B4J240 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV10A0A0B4J240 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV10A0A0B4J240 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV10A0A0B4J240 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV10A0A0B4J240 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV10A0A0B4J240 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
TRAV10A0A0B4J240 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV10A0A0B4J240 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV10A0A0B4J240 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV10A0A0B4J240 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC13.58□□□□□ -0.24
TRAV10A0A0B4J240 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV10A0A0B4J240 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC13.58□□□□□ -0.24
TRAV10A0A0B4J240 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC13.58□□□□□ -0.24
TRAV10A0A0B4J240 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV10A0A0B4J240 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV10A0A0B4J240 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms