Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV2A0A0B4J234 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV2A0A0B4J234 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV2A0A0B4J234 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV2A0A0B4J234 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV2A0A0B4J234 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV2A0A0B4J234 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 AC087289.5-201ENST00000586076 3175 ntBASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 AC020763.4-201ENST00000623414 4170 ntBASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 RPPH1-201ENST00000516869 333 ntBASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 EML3-217ENST00000531557 2509 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV2A0A0B4J234 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV2A0A0B4J234 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAV2A0A0B4J234 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV2A0A0B4J234 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAV2A0A0B4J234 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV2A0A0B4J234 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV2A0A0B4J234 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV2A0A0B4J234 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRAV2A0A0B4J234 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV2A0A0B4J234 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
TRAV2A0A0B4J234 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV2A0A0B4J234 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC14.56□□□□□ -0.08
TRAV2A0A0B4J234 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
TRAV2A0A0B4J234 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
TRAV2A0A0B4J234 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV2A0A0B4J234 RARRES2P10-201ENST00000564312 460 ntBASIC14.56□□□□□ -0.08
TRAV2A0A0B4J234 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC14.56□□□□□ -0.08
TRAV2A0A0B4J234 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC14.56□□□□□ -0.08
TRAV2A0A0B4J234 AL353708.3-201ENST00000610272 989 ntBASIC14.56□□□□□ -0.08
TRAV2A0A0B4J234 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TRAV2A0A0B4J234 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
TRAV2A0A0B4J234 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TRAV2A0A0B4J234 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV2A0A0B4J234 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAV2A0A0B4J234 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TRAV2A0A0B4J234 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAV2A0A0B4J234 AL135905.2-201ENST00000584934 1404 ntBASIC14.56□□□□□ -0.08
TRAV2A0A0B4J234 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV2A0A0B4J234 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TRAV2A0A0B4J234 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV2A0A0B4J234 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV2A0A0B4J234 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV2A0A0B4J234 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV2A0A0B4J234 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV2A0A0B4J234 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV2A0A0B4J234 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV2A0A0B4J234 ZNF815P-204ENST00000434898 1737 ntBASIC14.55□□□□□ -0.08
TRAV2A0A0B4J234 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV2A0A0B4J234 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV2A0A0B4J234 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
TRAV2A0A0B4J234 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV2A0A0B4J234 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV2A0A0B4J234 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV2A0A0B4J234 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV2A0A0B4J234 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms