Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
HLA-DRB4X5D2U9 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.54□□□□□ -2
HLA-DRB4X5D2U9 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.54□□□□□ -2
HLA-DRB4X5D2U9 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.54□□□□□ -2
HLA-DRB4X5D2U9 AL645937.1-201ENST00000641739 1652 ntBASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 AC234772.1-201ENST00000377927 937 ntBASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 RNU6-356P-201ENST00000384140 107 ntBASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 RPL21P3-201ENST00000395517 478 ntBASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 SNX10-203ENST00000409367 746 ntTSL 5 BASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 RNU2-65P-201ENST00000410162 185 ntBASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 RN7SKP123-201ENST00000410732 291 ntBASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 AC007899.1-201ENST00000412776 775 ntBASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 RPL31P2-201ENST00000413849 377 ntBASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 Z99755.1-201ENST00000414048 380 ntBASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 RPL23AP69-201ENST00000431134 458 ntBASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 AC104308.1-201ENST00000454621 333 ntBASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 ARPC3P2-201ENST00000457786 533 ntBASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 AC146507.2-201ENST00000460608 476 ntBASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 RPL37P6-202ENST00000464216 403 ntBASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 RPS4XP13-201ENST00000483219 789 ntBASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 RPL31P13-201ENST00000484151 370 ntBASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 RPL30P11-201ENST00000495304 339 ntBASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 MIR2276-201ENST00000516886 89 ntBASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 OR5B10P-201ENST00000532869 642 ntBASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 AP000619.3-201ENST00000535634 1127 ntBASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 AC034105.4-201ENST00000568304 277 ntBASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 AC005951.1-201ENST00000576706 485 ntBASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 AC016877.3-201ENST00000606778 504 ntBASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 AL391834.1-201ENST00000609609 560 ntBASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 AL161637.1-201ENST00000622380 412 ntBASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 XPOTP1-201ENST00000443317 2398 ntBASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.53□□□□□ -2
HLA-DRB4X5D2U9 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
HLA-DRB4X5D2U9 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HLA-DRB4X5D2U9 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
HLA-DRB4X5D2U9 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HLA-DRB4X5D2U9 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.52□□□□□ -2.01
HLA-DRB4X5D2U9 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.52□□□□□ -2.01
HLA-DRB4X5D2U9 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HLA-DRB4X5D2U9 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
HLA-DRB4X5D2U9 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.52□□□□□ -2.01
HLA-DRB4X5D2U9 RNU4-35P-201ENST00000362588 141 ntBASIC2.52□□□□□ -2.01
HLA-DRB4X5D2U9 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HLA-DRB4X5D2U9 MIR607-201ENST00000385241 96 ntBASIC2.52□□□□□ -2.01
HLA-DRB4X5D2U9 SNORD17-201ENST00000390930 237 ntBASIC2.52□□□□□ -2.01
HLA-DRB4X5D2U9 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.52□□□□□ -2.01
HLA-DRB4X5D2U9 RNA5SP344-201ENST00000411081 104 ntBASIC2.52□□□□□ -2.01
HLA-DRB4X5D2U9 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC2.52□□□□□ -2.01
HLA-DRB4X5D2U9 BX842559.1-201ENST00000419615 532 ntBASIC2.52□□□□□ -2.01
HLA-DRB4X5D2U9 AC093151.1-201ENST00000427711 313 ntBASIC2.52□□□□□ -2.01
HLA-DRB4X5D2U9 HMGN2P31-201ENST00000432430 273 ntBASIC2.52□□□□□ -2.01
HLA-DRB4X5D2U9 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
HLA-DRB4X5D2U9 CDC27P1-201ENST00000445384 715 ntBASIC2.52□□□□□ -2.01
HLA-DRB4X5D2U9 UBE2V2P4-201ENST00000447495 259 ntBASIC2.52□□□□□ -2.01
HLA-DRB4X5D2U9 RPL7P59-201ENST00000447700 943 ntBASIC2.52□□□□□ -2.01
HLA-DRB4X5D2U9 AL157884.3-201ENST00000448273 1184 ntBASIC2.52□□□□□ -2.01
HLA-DRB4X5D2U9 AC091564.1-201ENST00000464563 479 ntBASIC2.52□□□□□ -2.01
HLA-DRB4X5D2U9 RPL7P5-201ENST00000471472 736 ntBASIC2.52□□□□□ -2.01
HLA-DRB4X5D2U9 AC025518.1-201ENST00000479856 347 ntBASIC2.52□□□□□ -2.01
HLA-DRB4X5D2U9 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.52□□□□□ -2.01
HLA-DRB4X5D2U9 MTND4LP22-201ENST00000508209 276 ntBASIC2.52□□□□□ -2.01
HLA-DRB4X5D2U9 APOOP4-201ENST00000513530 597 ntBASIC2.52□□□□□ -2.01
HLA-DRB4X5D2U9 OR4R3P-201ENST00000525084 838 ntBASIC2.52□□□□□ -2.01
HLA-DRB4X5D2U9 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.52□□□□□ -2.01
HLA-DRB4X5D2U9 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HLA-DRB4X5D2U9 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.52□□□□□ -2.01
HLA-DRB4X5D2U9 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.52□□□□□ -2.01
HLA-DRB4X5D2U9 AC055876.1-202ENST00000567053 138 ntBASIC2.52□□□□□ -2.01
HLA-DRB4X5D2U9 AC015802.5-201ENST00000607478 399 ntBASIC2.52□□□□□ -2.01
HLA-DRB4X5D2U9 AC092354.2-201ENST00000607786 514 ntBASIC2.52□□□□□ -2.01
HLA-DRB4X5D2U9 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.52□□□□□ -2.01
HLA-DRB4X5D2U9 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.52□□□□□ -2.01
HLA-DRB4X5D2U9 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.52□□□□□ -2.01
HLA-DRB4X5D2U9 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
HLA-DRB4X5D2U9 AL392088.2-201ENST00000637607 285 ntBASIC2.52□□□□□ -2.01
HLA-DRB4X5D2U9 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 MTND5P19-201ENST00000424872 1794 ntBASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms