Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6□□□□□ -1.45
HRH3Q9Y5N1 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6□□□□□ -1.45
HRH3Q9Y5N1 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HRH3Q9Y5N1 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 RNU6-960P-201ENST00000364056 120 ntBASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 RNA5SP77-201ENST00000365394 120 ntBASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 RNU1-84P-201ENST00000365447 164 ntBASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 RNU6-823P-201ENST00000391042 103 ntBASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 MIR541-201ENST00000401360 84 ntBASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 MIR548M-201ENST00000408260 86 ntBASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 RNU2-23P-201ENST00000410545 195 ntBASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 RPL23AP69-201ENST00000431134 458 ntBASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 AC099799.1-201ENST00000439809 192 ntBASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 RPS15AP27-201ENST00000449183 343 ntBASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 AC108078.2-201ENST00000510750 236 ntBASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 AL133399.1-201ENST00000527476 298 ntBASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 HSBP1P1-201ENST00000555205 166 ntBASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 AL137100.2-201ENST00000555786 315 ntBASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 AL133153.1-201ENST00000557756 303 ntBASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 MIR3154-201ENST00000577829 84 ntBASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 RN7SL199P-201ENST00000578752 281 ntBASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 RN7SL656P-201ENST00000579044 281 ntBASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 RN7SL270P-201ENST00000579643 281 ntBASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 RN7SL404P-201ENST00000582421 281 ntBASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 RN7SL475P-201ENST00000583379 298 ntBASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 AC145423.1-201ENST00000605712 336 ntBASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 AC092724.1-201ENST00000624623 3397 ntBASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 AC091812.1-201ENST00000432235 1948 ntBASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 ZNF734P-201ENST00000419494 1534 ntBASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
HRH3Q9Y5N1 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HRH3Q9Y5N1 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HRH3Q9Y5N1 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.98□□□□□ -1.45
HRH3Q9Y5N1 LINC01613-201ENST00000561476 2780 ntBASIC5.98□□□□□ -1.45
HRH3Q9Y5N1 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HRH3Q9Y5N1 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
HRH3Q9Y5N1 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.98□□□□□ -1.45
HRH3Q9Y5N1 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HRH3Q9Y5N1 XIAPP3-201ENST00000312918 795 ntBASIC5.98□□□□□ -1.45
HRH3Q9Y5N1 RNU6-188P-201ENST00000364207 107 ntBASIC5.98□□□□□ -1.45
HRH3Q9Y5N1 Y_RNA.396-201ENST00000383949 103 ntBASIC5.98□□□□□ -1.45
HRH3Q9Y5N1 Y_RNA.512-201ENST00000384518 102 ntBASIC5.98□□□□□ -1.45
HRH3Q9Y5N1 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
HRH3Q9Y5N1 RNU2-15P-201ENST00000410692 191 ntBASIC5.98□□□□□ -1.45
HRH3Q9Y5N1 BX682237.1-201ENST00000415016 335 ntBASIC5.98□□□□□ -1.45
HRH3Q9Y5N1 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.98□□□□□ -1.45
HRH3Q9Y5N1 AL161722.2-201ENST00000434731 981 ntBASIC5.98□□□□□ -1.45
HRH3Q9Y5N1 AL645939.3-201ENST00000435408 225 ntBASIC5.98□□□□□ -1.45
HRH3Q9Y5N1 AC110602.1-201ENST00000437414 318 ntBASIC5.98□□□□□ -1.45
HRH3Q9Y5N1 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.98□□□□□ -1.45
HRH3Q9Y5N1 AC092013.1-201ENST00000438795 332 ntBASIC5.98□□□□□ -1.45
HRH3Q9Y5N1 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.98□□□□□ -1.45
HRH3Q9Y5N1 RPL23AP60-201ENST00000450011 454 ntBASIC5.98□□□□□ -1.45
HRH3Q9Y5N1 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.98□□□□□ -1.45
HRH3Q9Y5N1 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.98□□□□□ -1.45
HRH3Q9Y5N1 SETP20-201ENST00000457046 852 ntBASIC5.98□□□□□ -1.45
HRH3Q9Y5N1 RPS27P20-201ENST00000492051 246 ntBASIC5.98□□□□□ -1.45
HRH3Q9Y5N1 AP002812.1-201ENST00000495378 474 ntBASIC5.98□□□□□ -1.45
HRH3Q9Y5N1 AC018645.1-201ENST00000505003 109 ntBASIC5.98□□□□□ -1.45
HRH3Q9Y5N1 TBCAP3-201ENST00000512475 312 ntBASIC5.98□□□□□ -1.45
HRH3Q9Y5N1 RNU6-1092P-201ENST00000516955 87 ntBASIC5.98□□□□□ -1.45
HRH3Q9Y5N1 AC012400.1-201ENST00000518452 381 ntBASIC5.98□□□□□ -1.45
HRH3Q9Y5N1 AC011853.1-201ENST00000518911 454 ntBASIC5.98□□□□□ -1.45
HRH3Q9Y5N1 AC131281.1-201ENST00000522984 164 ntBASIC5.98□□□□□ -1.45
HRH3Q9Y5N1 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.98□□□□□ -1.45
HRH3Q9Y5N1 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.98□□□□□ -1.45
HRH3Q9Y5N1 AC004805.3-201ENST00000603178 310 ntBASIC5.98□□□□□ -1.45
HRH3Q9Y5N1 AC012443.1-201ENST00000605605 231 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms