Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 ZNF734P-201ENST00000419494 1534 ntBASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 RNU1-59P-201ENST00000364829 162 ntBASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 RNU4-2-201ENST00000365668 141 ntBASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 RNU6-432P-201ENST00000384196 109 ntBASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 Y_RNA.476-201ENST00000384347 108 ntBASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 Y_RNA.557-201ENST00000384680 107 ntBASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 RNA5SP107-201ENST00000411358 122 ntBASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 RNU6-516P-201ENST00000411381 104 ntBASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 HMGA1P8-201ENST00000414130 321 ntBASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 RAC1P6-201ENST00000423911 575 ntBASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 MRPS21P2-201ENST00000424704 264 ntBASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 Z98949.2-201ENST00000440996 144 ntBASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 RPS19P6-201ENST00000441327 433 ntBASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 AC073109.1-201ENST00000445066 978 ntBASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 GAS5-223ENST00000452197 483 ntTSL 3 BASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 AC116533.1-201ENST00000459748 321 ntBASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 RPL21P8-201ENST00000465083 535 ntBASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 MTATP8P1-201ENST00000467115 207 ntBASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 AC058823.1-201ENST00000485315 474 ntBASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 RN7SL714P-201ENST00000487050 298 ntBASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 AC097473.1-201ENST00000508142 408 ntBASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 AC093816.1-201ENST00000515076 913 ntBASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 IGLVIV-53-201ENST00000520107 367 ntBASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 IGHV4-55-201ENST00000520889 368 ntBASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 AC007494.1-201ENST00000562293 760 ntBASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 AC106782.4-201ENST00000568264 210 ntBASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 AC073046.2-201ENST00000604756 527 ntBASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 AC012443.1-201ENST00000605605 231 ntBASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 AL390877.1-201ENST00000605704 214 ntBASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 U1.25-201ENST00000614085 162 ntBASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 AC074140.1-201ENST00000621617 208 ntBASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 AC011416.1-201ENST00000514947 1732 ntBASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 ANAPC1P1-201ENST00000426186 2145 ntBASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 GABPAP-201ENST00000419271 1356 ntBASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 GUCY1B2-204ENST00000531898 1979 ntBASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 RNU6-1115P-201ENST00000362490 106 ntBASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 Y_RNA.364-201ENST00000365532 101 ntBASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 SNORA75B-201ENST00000384053 137 ntBASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 SNORD3H-201ENST00000384486 214 ntBASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 MT-TR-201ENST00000387439 65 ntBASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 MIR450B-201ENST00000401182 78 ntBASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 SNRPEP6-201ENST00000407465 277 ntBASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 Y_RNA.646-201ENST00000410980 101 ntBASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 AL139095.3-201ENST00000419672 1203 ntBASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 AC019185.1-201ENST00000442718 389 ntBASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 CECR9-201ENST00000453421 199 ntBASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 AC005008.1-201ENST00000456151 612 ntBASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 SCARNA18-201ENST00000459004 134 ntBASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 RN7SL643P-201ENST00000471845 291 ntBASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 RPL23AP55-201ENST00000498163 452 ntBASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 HMGB1P21-201ENST00000502313 581 ntBASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 RNU6-1092P-201ENST00000516955 87 ntBASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 MIR4433B-201ENST00000581329 102 ntBASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 MIR4732-201ENST00000581873 76 ntBASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 AC024267.2-201ENST00000582737 417 ntBASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 GLYATL1P2-202ENST00000588046 902 ntBASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 AC011500.1-201ENST00000601963 469 ntBASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 AC123786.2-201ENST00000603459 275 ntBASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 MIR7159-201ENST00000620587 66 ntBASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 PLCE1P1-201ENST00000622094 305 ntBASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms