Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AL031584.1-201ENST00000447169 754 ntBASIC4.91□□□□□ -1.62
COL20A1Q9P218 RPL26P28-201ENST00000451325 435 ntBASIC4.91□□□□□ -1.62
COL20A1Q9P218 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.91□□□□□ -1.62
COL20A1Q9P218 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.91□□□□□ -1.62
COL20A1Q9P218 USP9YP10-201ENST00000454868 628 ntBASIC4.91□□□□□ -1.62
COL20A1Q9P218 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.91□□□□□ -1.62
COL20A1Q9P218 RN7SL812P-201ENST00000493791 279 ntBASIC4.91□□□□□ -1.62
COL20A1Q9P218 SNX5P1-201ENST00000505757 1041 ntBASIC4.91□□□□□ -1.62
COL20A1Q9P218 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL20A1Q9P218 USP9YP5-201ENST00000511770 630 ntBASIC4.91□□□□□ -1.62
COL20A1Q9P218 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL20A1Q9P218 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4.91□□□□□ -1.62
COL20A1Q9P218 AC026402.1-201ENST00000513642 170 ntBASIC4.91□□□□□ -1.62
COL20A1Q9P218 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.91□□□□□ -1.62
COL20A1Q9P218 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.91□□□□□ -1.62
COL20A1Q9P218 AP000790.1-201ENST00000528891 737 ntBASIC4.91□□□□□ -1.62
COL20A1Q9P218 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.91□□□□□ -1.62
COL20A1Q9P218 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL20A1Q9P218 TVP23BP1-201ENST00000557500 617 ntBASIC4.91□□□□□ -1.62
COL20A1Q9P218 AC107982.3-201ENST00000584957 985 ntBASIC4.91□□□□□ -1.62
COL20A1Q9P218 HMGB2P1-201ENST00000591146 634 ntBASIC4.91□□□□□ -1.62
COL20A1Q9P218 RPL7P50-201ENST00000600588 727 ntBASIC4.91□□□□□ -1.62
COL20A1Q9P218 AL358072.1-201ENST00000604156 575 ntBASIC4.91□□□□□ -1.62
COL20A1Q9P218 OR2AS2P-201ENST00000606902 342 ntBASIC4.91□□□□□ -1.62
COL20A1Q9P218 AP001521.1-201ENST00000609150 300 ntBASIC4.91□□□□□ -1.62
COL20A1Q9P218 MIR8059-201ENST00000620427 81 ntBASIC4.91□□□□□ -1.62
COL20A1Q9P218 AC139792.2-201ENST00000624218 587 ntBASIC4.91□□□□□ -1.62
COL20A1Q9P218 AC092184.1-201ENST00000625042 715 ntBASIC4.91□□□□□ -1.62
COL20A1Q9P218 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.91□□□□□ -1.62
COL20A1Q9P218 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.91□□□□□ -1.62
COL20A1Q9P218 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL20A1Q9P218 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.91□□□□□ -1.62
COL20A1Q9P218 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL20A1Q9P218 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.91□□□□□ -1.62
COL20A1Q9P218 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
COL20A1Q9P218 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.91□□□□□ -1.62
COL20A1Q9P218 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
COL20A1Q9P218 AL079343.1-201ENST00000572358 1771 ntBASIC4.91□□□□□ -1.62
COL20A1Q9P218 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL20A1Q9P218 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL20A1Q9P218 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL20A1Q9P218 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.91□□□□□ -1.62
COL20A1Q9P218 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
COL20A1Q9P218 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.9□□□□□ -1.62
COL20A1Q9P218 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
COL20A1Q9P218 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.9□□□□□ -1.62
COL20A1Q9P218 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
COL20A1Q9P218 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
COL20A1Q9P218 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
COL20A1Q9P218 RNU1-94P-201ENST00000362627 173 ntBASIC4.9□□□□□ -1.63
COL20A1Q9P218 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.9□□□□□ -1.63
COL20A1Q9P218 RNU6-921P-201ENST00000384361 107 ntBASIC4.9□□□□□ -1.63
COL20A1Q9P218 Y_RNA.560-201ENST00000384689 102 ntBASIC4.9□□□□□ -1.63
COL20A1Q9P218 MIR649-201ENST00000384843 97 ntBASIC4.9□□□□□ -1.63
COL20A1Q9P218 RPS26P8-201ENST00000393490 348 ntBASIC4.9□□□□□ -1.63
COL20A1Q9P218 AL022722.2-201ENST00000402519 180 ntBASIC4.9□□□□□ -1.63
COL20A1Q9P218 RPS3AP9-201ENST00000417027 792 ntBASIC4.9□□□□□ -1.63
COL20A1Q9P218 AL358176.3-201ENST00000420757 454 ntBASIC4.9□□□□□ -1.63
COL20A1Q9P218 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.9□□□□□ -1.63
COL20A1Q9P218 AC012519.1-201ENST00000424588 610 ntBASIC4.9□□□□□ -1.63
COL20A1Q9P218 COX6CP15-201ENST00000426313 211 ntBASIC4.9□□□□□ -1.63
COL20A1Q9P218 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.9□□□□□ -1.63
COL20A1Q9P218 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.9□□□□□ -1.63
COL20A1Q9P218 CEACAMP1-201ENST00000434624 1035 ntBASIC4.9□□□□□ -1.63
COL20A1Q9P218 MTND4P6-201ENST00000438297 472 ntBASIC4.9□□□□□ -1.63
COL20A1Q9P218 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.9□□□□□ -1.63
COL20A1Q9P218 AL512326.1-201ENST00000443050 721 ntBASIC4.9□□□□□ -1.63
COL20A1Q9P218 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.9□□□□□ -1.63
COL20A1Q9P218 RPS27AP8-201ENST00000452665 445 ntBASIC4.9□□□□□ -1.63
COL20A1Q9P218 MTCO3P16-201ENST00000454456 754 ntBASIC4.9□□□□□ -1.63
COL20A1Q9P218 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
COL20A1Q9P218 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.9□□□□□ -1.63
COL20A1Q9P218 MTCO3P2-201ENST00000457365 171 ntBASIC4.9□□□□□ -1.63
COL20A1Q9P218 APOOP2-201ENST00000461561 539 ntBASIC4.9□□□□□ -1.63
COL20A1Q9P218 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.9□□□□□ -1.63
COL20A1Q9P218 CCDC75P1-201ENST00000469247 791 ntBASIC4.9□□□□□ -1.63
COL20A1Q9P218 AC090013.1-201ENST00000485147 480 ntBASIC4.9□□□□□ -1.63
COL20A1Q9P218 RPS27AP13-201ENST00000498403 237 ntBASIC4.9□□□□□ -1.63
COL20A1Q9P218 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.9□□□□□ -1.63
COL20A1Q9P218 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.9□□□□□ -1.63
COL20A1Q9P218 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
COL20A1Q9P218 DSTNP2-201ENST00000504533 515 ntBASIC4.9□□□□□ -1.63
COL20A1Q9P218 HMGB3P13-201ENST00000511263 607 ntBASIC4.9□□□□□ -1.63
COL20A1Q9P218 RNU6-583P-201ENST00000516012 92 ntBASIC4.9□□□□□ -1.63
COL20A1Q9P218 RNY4P37-201ENST00000516225 96 ntBASIC4.9□□□□□ -1.63
COL20A1Q9P218 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.9□□□□□ -1.63
COL20A1Q9P218 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.9□□□□□ -1.63
COL20A1Q9P218 LSM6P2-201ENST00000552208 177 ntBASIC4.9□□□□□ -1.63
COL20A1Q9P218 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
COL20A1Q9P218 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.9□□□□□ -1.63
COL20A1Q9P218 MIR3915-201ENST00000578518 97 ntBASIC4.9□□□□□ -1.63
COL20A1Q9P218 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.9□□□□□ -1.63
COL20A1Q9P218 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.9□□□□□ -1.63
COL20A1Q9P218 AC245008.1-201ENST00000608123 476 ntBASIC4.9□□□□□ -1.63
COL20A1Q9P218 AL031667.3-201ENST00000620124 655 ntBASIC4.9□□□□□ -1.63
COL20A1Q9P218 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
COL20A1Q9P218 AC007494.3-201ENST00000624660 743 ntBASIC4.9□□□□□ -1.63
COL20A1Q9P218 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
COL20A1Q9P218 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.9□□□□□ -1.63
COL20A1Q9P218 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms