Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.47□□□□□ -1.69
NCKIPSDQ9NZQ3 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.47□□□□□ -1.69
NCKIPSDQ9NZQ3 DDX43P2-201ENST00000604753 1354 ntBASIC4.47□□□□□ -1.69
NCKIPSDQ9NZQ3 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NCKIPSDQ9NZQ3 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NCKIPSDQ9NZQ3 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.46□□□□□ -1.69
NCKIPSDQ9NZQ3 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
NCKIPSDQ9NZQ3 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.46□□□□□ -1.69
NCKIPSDQ9NZQ3 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.46□□□□□ -1.69
NCKIPSDQ9NZQ3 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 NXPH1-205ENST00000602349 1953 ntBASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 RNU6-560P-201ENST00000364007 108 ntBASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 RNU6-553P-201ENST00000364047 96 ntBASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 Y_RNA.408-201ENST00000383987 102 ntBASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 RNU5A-2P-201ENST00000384337 116 ntBASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 SNORA70C-201ENST00000384538 135 ntBASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 SNORD116-23-201ENST00000384645 92 ntBASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 RN7SKP263-201ENST00000411194 309 ntBASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 AC011933.1-201ENST00000413334 321 ntBASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 AC004022.2-201ENST00000413824 193 ntBASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 RPL17P36-201ENST00000420302 549 ntBASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 MTND4P20-201ENST00000424125 869 ntBASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 MTCO3P30-201ENST00000426425 670 ntBASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 AL513175.1-201ENST00000431492 780 ntBASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 KCTD10P1-201ENST00000434203 625 ntBASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 MTCYBP3-201ENST00000445588 1137 ntBASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 VN1R32P-201ENST00000452234 905 ntBASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 HMGN3P1-201ENST00000453847 193 ntBASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 AC116533.1-201ENST00000459748 321 ntBASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 AC007537.2-201ENST00000472093 511 ntBASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 BZW1P2-201ENST00000473537 826 ntBASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 AC025674.1-201ENST00000507074 324 ntBASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 MTATP6P22-201ENST00000507369 598 ntBASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 AC110792.2-201ENST00000510278 224 ntBASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 AC116353.3-201ENST00000511215 249 ntBASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 RN7SKP21-201ENST00000516503 220 ntBASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 NPM1P6-201ENST00000521088 871 ntBASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 AC069240.1-201ENST00000548774 375 ntBASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 GTF2IP8-201ENST00000560687 584 ntBASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 MIR3939-201ENST00000582614 106 ntBASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 IPO5P1-202ENST00000600039 287 ntBASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 AC090181.2-201ENST00000602975 672 ntBASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 AC135507.1-201ENST00000607214 561 ntBASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 AC068831.8-201ENST00000620171 435 ntBASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 ZNF542P-204ENST00000482727 1305 ntBASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
NCKIPSDQ9NZQ3 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 MTND4P5-201ENST00000435821 1374 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 AC025125.1-201ENST00000624743 1922 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 AC021146.4-201ENST00000309229 279 ntBASIC4.45□□□□□ -1.7
NCKIPSDQ9NZQ3 RNA5SP52-201ENST00000362448 134 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 170.9 ms