Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 AC073593.1-201ENST00000624500 411 ntBASIC5.66□□□□□ -1.5
BHLHE41Q9C0J9 AP000550.3-201ENST00000637734 379 ntBASIC5.66□□□□□ -1.5
BHLHE41Q9C0J9 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
BHLHE41Q9C0J9 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
BHLHE41Q9C0J9 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
BHLHE41Q9C0J9 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
BHLHE41Q9C0J9 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.66□□□□□ -1.5
BHLHE41Q9C0J9 AC004656.1-201ENST00000568479 4951 ntBASIC5.66□□□□□ -1.5
BHLHE41Q9C0J9 AC007823.1-201ENST00000569932 1566 ntBASIC5.66□□□□□ -1.5
BHLHE41Q9C0J9 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
BHLHE41Q9C0J9 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
BHLHE41Q9C0J9 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.66□□□□□ -1.5
BHLHE41Q9C0J9 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.66□□□□□ -1.5
BHLHE41Q9C0J9 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
BHLHE41Q9C0J9 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
BHLHE41Q9C0J9 PROS2P-201ENST00000474651 1951 ntBASIC5.66□□□□□ -1.5
BHLHE41Q9C0J9 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 CD36-221ENST00000534394 1741 ntTSL 2 BASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 AL137141.1-201ENST00000624622 4836 ntBASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 AC123769.1-201ENST00000530992 3192 ntBASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 Y_RNA.31-201ENST00000362574 102 ntBASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 Y_RNA.187-201ENST00000363918 113 ntBASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 Y_RNA.339-201ENST00000365325 102 ntBASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 MIR548K-201ENST00000408406 116 ntBASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 RN7SKP17-201ENST00000411242 351 ntBASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 AC005517.2-201ENST00000424673 553 ntBASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 AC099677.3-201ENST00000427081 395 ntBASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 FTLP8-201ENST00000446770 267 ntBASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 AC016724.1-201ENST00000453215 421 ntBASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 PFN1P6-201ENST00000476786 399 ntBASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 AP002453.1-201ENST00000492327 668 ntBASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 AL049874.2-201ENST00000492636 288 ntBASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 AL139099.1-201ENST00000497398 403 ntBASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 RNU6-1038P-201ENST00000516516 104 ntBASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 MTND4P7-201ENST00000523876 130 ntBASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 MDM2-233ENST00000545204 398 ntTSL 5 BASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 MIR4703-201ENST00000577728 79 ntBASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 RN7SL802P-201ENST00000577858 299 ntBASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 MIR4701-201ENST00000583094 63 ntBASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 AC113194.1-201ENST00000606037 500 ntBASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 AC023813.4-201ENST00000607580 580 ntBASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 AC092807.2-201ENST00000609367 243 ntBASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.65□□□□□ -1.5
BHLHE41Q9C0J9 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
BHLHE41Q9C0J9 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
BHLHE41Q9C0J9 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
BHLHE41Q9C0J9 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
BHLHE41Q9C0J9 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.65□□□□□ -1.51
BHLHE41Q9C0J9 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.65□□□□□ -1.51
BHLHE41Q9C0J9 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
BHLHE41Q9C0J9 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
BHLHE41Q9C0J9 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
BHLHE41Q9C0J9 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
BHLHE41Q9C0J9 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
BHLHE41Q9C0J9 AC007342.5-201ENST00000571340 2142 ntBASIC5.65□□□□□ -1.51
BHLHE41Q9C0J9 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
BHLHE41Q9C0J9 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 AC011155.1-201ENST00000316512 456 ntBASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms