Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
COL25A1Q9BXS0 AC145138.1-201ENST00000512908 2851 ntBASIC6.12□□□□□ -1.43
COL25A1Q9BXS0 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC6.12□□□□□ -1.43
COL25A1Q9BXS0 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL25A1Q9BXS0 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL25A1Q9BXS0 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.12□□□□□ -1.43
COL25A1Q9BXS0 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL25A1Q9BXS0 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL25A1Q9BXS0 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL25A1Q9BXS0 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL25A1Q9BXS0 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL25A1Q9BXS0 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COL25A1Q9BXS0 MAK-202ENST00000354489 3941 ntTSL 5 BASIC6.12□□□□□ -1.43
COL25A1Q9BXS0 Y_RNA.214-201ENST00000364201 112 ntBASIC6.12□□□□□ -1.43
COL25A1Q9BXS0 RNU6-378P-201ENST00000384324 107 ntBASIC6.12□□□□□ -1.43
COL25A1Q9BXS0 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL25A1Q9BXS0 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.12□□□□□ -1.43
COL25A1Q9BXS0 RPSAP35-201ENST00000413753 818 ntBASIC6.12□□□□□ -1.43
COL25A1Q9BXS0 AL133396.1-201ENST00000432048 687 ntBASIC6.12□□□□□ -1.43
COL25A1Q9BXS0 AL035090.1-201ENST00000454835 332 ntBASIC6.12□□□□□ -1.43
COL25A1Q9BXS0 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.12□□□□□ -1.43
COL25A1Q9BXS0 DEFB109F-201ENST00000491870 277 ntBASIC6.12□□□□□ -1.43
COL25A1Q9BXS0 AC008526.1-201ENST00000509149 338 ntBASIC6.12□□□□□ -1.43
COL25A1Q9BXS0 GAPDHP62-201ENST00000515313 990 ntBASIC6.12□□□□□ -1.43
COL25A1Q9BXS0 Y_RNA.670-201ENST00000516255 105 ntBASIC6.12□□□□□ -1.43
COL25A1Q9BXS0 RNU5B-3P-201ENST00000516601 115 ntBASIC6.12□□□□□ -1.43
COL25A1Q9BXS0 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.12□□□□□ -1.43
COL25A1Q9BXS0 IGKV3D-31-201ENST00000519131 281 ntBASIC6.12□□□□□ -1.43
COL25A1Q9BXS0 MTND4P7-201ENST00000523876 130 ntBASIC6.12□□□□□ -1.43
COL25A1Q9BXS0 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
COL25A1Q9BXS0 MIR548Y-201ENST00000582739 110 ntBASIC6.12□□□□□ -1.43
COL25A1Q9BXS0 MIR8089-201ENST00000620165 82 ntBASIC6.12□□□□□ -1.43
COL25A1Q9BXS0 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC6.12□□□□□ -1.43
COL25A1Q9BXS0 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
COL25A1Q9BXS0 MAPK10-347ENST00000641762 2856 ntBASIC6.12□□□□□ -1.43
COL25A1Q9BXS0 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COL25A1Q9BXS0 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC6.12□□□□□ -1.43
COL25A1Q9BXS0 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
COL25A1Q9BXS0 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL25A1Q9BXS0 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL25A1Q9BXS0 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 Y_RNA.26-201ENST00000362539 101 ntBASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 Y_RNA.39-201ENST00000362620 98 ntBASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 U3.2-201ENST00000362981 210 ntBASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 Y_RNA.416-201ENST00000384014 113 ntBASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 Y_RNA.539-201ENST00000384635 107 ntBASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 RNU6-1050P-201ENST00000410388 107 ntBASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 RBMY1KP-201ENST00000423480 476 ntBASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 AL118520.1-201ENST00000450770 291 ntBASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 AL389915.2-201ENST00000454576 441 ntBASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 AC022493.2-201ENST00000506122 481 ntBASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 AC116337.1-201ENST00000509680 687 ntBASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 RNU6-120P-201ENST00000516077 103 ntBASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 IGLV3-30-201ENST00000524362 298 ntBASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 HSBP1P1-201ENST00000555205 166 ntBASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 MIR4284-201ENST00000578924 81 ntBASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 MIR4775-201ENST00000581168 75 ntBASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 AC006254.3-201ENST00000603353 884 ntBASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 AL121992.2-201ENST00000606262 256 ntBASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 AC091768.1-201ENST00000609258 930 ntBASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 ANAPC1P1-201ENST00000426186 2145 ntBASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
COL25A1Q9BXS0 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms