Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.47□□□□□ -1.69
SNX18Q96RF0 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.47□□□□□ -1.69
SNX18Q96RF0 SEPT7P9-203ENST00000604116 343 ntBASIC4.47□□□□□ -1.69
SNX18Q96RF0 AC115286.1-201ENST00000604298 434 ntBASIC4.47□□□□□ -1.69
SNX18Q96RF0 HSPE1P14-201ENST00000605812 302 ntBASIC4.47□□□□□ -1.69
SNX18Q96RF0 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.47□□□□□ -1.69
SNX18Q96RF0 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.47□□□□□ -1.69
SNX18Q96RF0 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.47□□□□□ -1.69
SNX18Q96RF0 AC099494.2-201ENST00000623371 978 ntBASIC4.47□□□□□ -1.69
SNX18Q96RF0 AP002799.1-201ENST00000623552 423 ntBASIC4.47□□□□□ -1.69
SNX18Q96RF0 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.47□□□□□ -1.69
SNX18Q96RF0 AC099654.12-201ENST00000639868 649 ntBASIC4.47□□□□□ -1.69
SNX18Q96RF0 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SNX18Q96RF0 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SNX18Q96RF0 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.47□□□□□ -1.69
SNX18Q96RF0 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.47□□□□□ -1.69
SNX18Q96RF0 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
SNX18Q96RF0 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.47□□□□□ -1.69
SNX18Q96RF0 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SNX18Q96RF0 XPOTP1-201ENST00000443317 2398 ntBASIC4.47□□□□□ -1.69
SNX18Q96RF0 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SNX18Q96RF0 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SNX18Q96RF0 CYP1D1P-201ENST00000416662 1433 ntBASIC4.46□□□□□ -1.69
SNX18Q96RF0 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
SNX18Q96RF0 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
SNX18Q96RF0 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.46□□□□□ -1.69
SNX18Q96RF0 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.46□□□□□ -1.69
SNX18Q96RF0 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.46□□□□□ -1.69
SNX18Q96RF0 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.46□□□□□ -1.69
SNX18Q96RF0 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.69
SNX18Q96RF0 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
SNX18Q96RF0 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SNX18Q96RF0 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
SNX18Q96RF0 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SNX18Q96RF0 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
SNX18Q96RF0 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SNX18Q96RF0 RNU6-462P-201ENST00000362659 105 ntBASIC4.46□□□□□ -1.7
SNX18Q96RF0 RN7SKP103-201ENST00000363848 320 ntBASIC4.46□□□□□ -1.7
SNX18Q96RF0 DSTNP4-201ENST00000399472 474 ntBASIC4.46□□□□□ -1.7
SNX18Q96RF0 AL133270.1-201ENST00000402635 279 ntBASIC4.46□□□□□ -1.7
SNX18Q96RF0 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SNX18Q96RF0 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.46□□□□□ -1.7
SNX18Q96RF0 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.46□□□□□ -1.7
SNX18Q96RF0 AC099336.2-201ENST00000422457 254 ntBASIC4.46□□□□□ -1.7
SNX18Q96RF0 CKS1BP6-201ENST00000424932 240 ntBASIC4.46□□□□□ -1.7
SNX18Q96RF0 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.46□□□□□ -1.7
SNX18Q96RF0 AC091862.1-201ENST00000438016 1100 ntBASIC4.46□□□□□ -1.7
SNX18Q96RF0 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.46□□□□□ -1.7
SNX18Q96RF0 AL031667.1-201ENST00000440222 725 ntBASIC4.46□□□□□ -1.7
SNX18Q96RF0 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.46□□□□□ -1.7
SNX18Q96RF0 AC239367.2-201ENST00000447309 705 ntBASIC4.46□□□□□ -1.7
SNX18Q96RF0 TRGVB-201ENST00000453257 471 ntBASIC4.46□□□□□ -1.7
SNX18Q96RF0 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.46□□□□□ -1.7
SNX18Q96RF0 AC099560.2-201ENST00000457554 255 ntBASIC4.46□□□□□ -1.7
SNX18Q96RF0 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.46□□□□□ -1.7
SNX18Q96RF0 AC009127.1-201ENST00000467090 155 ntBASIC4.46□□□□□ -1.7
SNX18Q96RF0 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.46□□□□□ -1.7
SNX18Q96RF0 AC110775.1-201ENST00000513721 462 ntBASIC4.46□□□□□ -1.7
SNX18Q96RF0 RNA5SP216-201ENST00000516111 123 ntBASIC4.46□□□□□ -1.7
SNX18Q96RF0 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.46□□□□□ -1.7
SNX18Q96RF0 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.46□□□□□ -1.7
SNX18Q96RF0 AC025881.1-201ENST00000518851 512 ntBASIC4.46□□□□□ -1.7
SNX18Q96RF0 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.46□□□□□ -1.7
SNX18Q96RF0 AC012339.2-201ENST00000523996 453 ntBASIC4.46□□□□□ -1.7
SNX18Q96RF0 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.46□□□□□ -1.7
SNX18Q96RF0 AC092490.3-201ENST00000545370 572 ntBASIC4.46□□□□□ -1.7
SNX18Q96RF0 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.46□□□□□ -1.7
SNX18Q96RF0 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.46□□□□□ -1.7
SNX18Q96RF0 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.46□□□□□ -1.7
SNX18Q96RF0 NMNAT1P1-201ENST00000554095 876 ntBASIC4.46□□□□□ -1.7
SNX18Q96RF0 AL133241.1-201ENST00000556832 487 ntBASIC4.46□□□□□ -1.7
SNX18Q96RF0 SULT1C2P1-202ENST00000562418 459 ntBASIC4.46□□□□□ -1.7
SNX18Q96RF0 AC009063.1-201ENST00000563342 702 ntBASIC4.46□□□□□ -1.7
SNX18Q96RF0 AC087481.2-201ENST00000565492 330 ntBASIC4.46□□□□□ -1.7
SNX18Q96RF0 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.46□□□□□ -1.7
SNX18Q96RF0 MIR4528-201ENST00000577763 90 ntBASIC4.46□□□□□ -1.7
SNX18Q96RF0 AC011447.4-201ENST00000587562 111 ntBASIC4.46□□□□□ -1.7
SNX18Q96RF0 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.46□□□□□ -1.7
SNX18Q96RF0 AC116447.1-201ENST00000613153 453 ntBASIC4.46□□□□□ -1.7
SNX18Q96RF0 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.46□□□□□ -1.7
SNX18Q96RF0 AC027807.2-201ENST00000616099 408 ntBASIC4.46□□□□□ -1.7
SNX18Q96RF0 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.46□□□□□ -1.7
SNX18Q96RF0 AC005086.4-201ENST00000623065 213 ntBASIC4.46□□□□□ -1.7
SNX18Q96RF0 AL133243.3-201ENST00000617415 3004 ntBASIC4.46□□□□□ -1.7
SNX18Q96RF0 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SNX18Q96RF0 LINC00561-201ENST00000565815 2738 ntBASIC4.46□□□□□ -1.7
SNX18Q96RF0 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SNX18Q96RF0 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SNX18Q96RF0 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.46□□□□□ -1.7
SNX18Q96RF0 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SNX18Q96RF0 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
SNX18Q96RF0 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SNX18Q96RF0 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SNX18Q96RF0 IRF5P1-201ENST00000504852 2164 ntBASIC4.46□□□□□ -1.7
SNX18Q96RF0 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SNX18Q96RF0 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.45□□□□□ -1.7
SNX18Q96RF0 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SNX18Q96RF0 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.45□□□□□ -1.7
SNX18Q96RF0 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
SNX18Q96RF0 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms