Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 AC008498.1-201ENST00000613012 531 ntBASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 U6atac.1-201ENST00000616025 117 ntBASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 MIR8069-1-201ENST00000616627 86 ntBASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 AL139089.1-201ENST00000620372 975 ntBASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 MIR8069-2-201ENST00000621412 86 ntBASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 U6.101-201ENST00000637707 76 ntBASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 MTND5P28-201ENST00000438005 1594 ntBASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 AL442639.1-201ENST00000625030 1899 ntBASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 SDAD1P1-202ENST00000524156 2051 ntBASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 AC000123.3-201ENST00000624029 4975 ntBASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 RNVU1-6-201ENST00000364688 164 ntBASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 RNU6-178P-201ENST00000384631 104 ntBASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 RNU2-66P-201ENST00000410650 161 ntBASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 AL445487.1-201ENST00000415694 1580 ntBASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 BX510359.2-201ENST00000417920 305 ntBASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 AL353597.2-202ENST00000434901 373 ntBASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 RPL23AP74-201ENST00000437246 471 ntBASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 Z80107.2-201ENST00000445127 392 ntBASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 AL031584.1-201ENST00000447169 754 ntBASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 APOOP2-201ENST00000461561 539 ntBASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 AC087879.1-201ENST00000474343 374 ntBASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 AC104763.1-201ENST00000475274 360 ntBASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 RPL9P33-201ENST00000484311 566 ntBASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 RPL7P24-201ENST00000493052 752 ntBASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 AF131216.2-201ENST00000512316 564 ntBASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 CDH12P4-201ENST00000517835 295 ntBASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 CDH12P3-201ENST00000517935 295 ntBASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 CDH12P1-201ENST00000518435 295 ntBASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 AC105129.1-201ENST00000560250 297 ntBASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 AC018552.3-201ENST00000567416 561 ntBASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 RBM11P1-201ENST00000604951 799 ntBASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 AC080013.4-201ENST00000607624 649 ntBASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 AC097468.3-201ENST00000607956 456 ntBASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 AC108747.1-201ENST00000609508 535 ntBASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 AL357080.1-201ENST00000617394 239 ntBASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 MIR6864-201ENST00000617935 70 ntBASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.42□□□□□ -1.7
CTHRC1Q96CG8 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 AP002907.1-201ENST00000606361 1430 ntBASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 SNORA51.6-201ENST00000384151 125 ntBASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 U8.14-201ENST00000390843 143 ntBASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 RPS3AP23-201ENST00000401762 784 ntBASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 AL592291.1-201ENST00000403830 352 ntBASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.41□□□□□ -1.7
CTHRC1Q96CG8 RAD23BP2-201ENST00000416003 1207 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms