Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HPS1Q92902 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HPS1Q92902 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HPS1Q92902 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HPS1Q92902 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HPS1Q92902 Y_RNA.234-201ENST00000364409 97 ntBASIC6.18□□□□□ -1.42
HPS1Q92902 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HPS1Q92902 RFX3-203ENST00000381984 364 ntTSL 3 BASIC6.18□□□□□ -1.42
HPS1Q92902 RNU6-278P-201ENST00000390945 109 ntBASIC6.18□□□□□ -1.42
HPS1Q92902 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC6.18□□□□□ -1.42
HPS1Q92902 AL136372.1-201ENST00000403060 228 ntBASIC6.18□□□□□ -1.42
HPS1Q92902 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
HPS1Q92902 AL662791.3-201ENST00000413771 776 ntBASIC6.18□□□□□ -1.42
HPS1Q92902 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HPS1Q92902 AL359633.1-201ENST00000421403 310 ntBASIC6.18□□□□□ -1.42
HPS1Q92902 GAPDHP57-201ENST00000424400 585 ntBASIC6.18□□□□□ -1.42
HPS1Q92902 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6.18□□□□□ -1.42
HPS1Q92902 AC091286.1-201ENST00000431233 461 ntBASIC6.18□□□□□ -1.42
HPS1Q92902 AL353597.2-202ENST00000434901 373 ntBASIC6.18□□□□□ -1.42
HPS1Q92902 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC6.18□□□□□ -1.42
HPS1Q92902 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC6.18□□□□□ -1.42
HPS1Q92902 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC6.18□□□□□ -1.42
HPS1Q92902 HMGB1P4-201ENST00000455362 567 ntBASIC6.18□□□□□ -1.42
HPS1Q92902 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HPS1Q92902 snoU13.8-201ENST00000458890 104 ntBASIC6.18□□□□□ -1.42
HPS1Q92902 RNU7-167P-201ENST00000459160 62 ntBASIC6.18□□□□□ -1.42
HPS1Q92902 RN7SL456P-201ENST00000469290 295 ntBASIC6.18□□□□□ -1.42
HPS1Q92902 AC087884.1-201ENST00000469738 328 ntBASIC6.18□□□□□ -1.42
HPS1Q92902 RN7SL259P-201ENST00000478499 253 ntBASIC6.18□□□□□ -1.42
HPS1Q92902 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.18□□□□□ -1.42
HPS1Q92902 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC6.18□□□□□ -1.42
HPS1Q92902 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC6.18□□□□□ -1.42
HPS1Q92902 RNA5SP96-201ENST00000516041 107 ntBASIC6.18□□□□□ -1.42
HPS1Q92902 IGLV1-62-201ENST00000518003 441 ntBASIC6.18□□□□□ -1.42
HPS1Q92902 AC034114.1-201ENST00000520293 285 ntBASIC6.18□□□□□ -1.42
HPS1Q92902 RNU6-323P-201ENST00000521915 107 ntBASIC6.18□□□□□ -1.42
HPS1Q92902 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC6.18□□□□□ -1.42
HPS1Q92902 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.18□□□□□ -1.42
HPS1Q92902 SSU72P6-201ENST00000532644 488 ntBASIC6.18□□□□□ -1.42
HPS1Q92902 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC6.18□□□□□ -1.42
HPS1Q92902 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC6.18□□□□□ -1.42
HPS1Q92902 MIR3135A-201ENST00000578460 77 ntBASIC6.18□□□□□ -1.42
HPS1Q92902 COX6CP3-201ENST00000580869 223 ntBASIC6.18□□□□□ -1.42
HPS1Q92902 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.18□□□□□ -1.42
HPS1Q92902 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC6.18□□□□□ -1.42
HPS1Q92902 SIGLEC31P-201ENST00000594237 551 ntBASIC6.18□□□□□ -1.42
HPS1Q92902 RPS29P30-201ENST00000600975 111 ntBASIC6.18□□□□□ -1.42
HPS1Q92902 MIR6070-201ENST00000613967 103 ntBASIC6.18□□□□□ -1.42
HPS1Q92902 AC244100.4-201ENST00000617747 388 ntBASIC6.18□□□□□ -1.42
HPS1Q92902 AC006453.3-201ENST00000635891 377 ntBASIC6.18□□□□□ -1.42
HPS1Q92902 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.18□□□□□ -1.42
HPS1Q92902 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
HPS1Q92902 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HPS1Q92902 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
HPS1Q92902 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.18□□□□□ -1.42
HPS1Q92902 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC6.18□□□□□ -1.42
HPS1Q92902 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HPS1Q92902 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
HPS1Q92902 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HPS1Q92902 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.17□□□□□ -1.42
HPS1Q92902 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
HPS1Q92902 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
HPS1Q92902 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
HPS1Q92902 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
HPS1Q92902 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.17□□□□□ -1.42
HPS1Q92902 AC005183.1-201ENST00000603687 1979 ntBASIC6.17□□□□□ -1.42
HPS1Q92902 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.17□□□□□ -1.42
HPS1Q92902 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
HPS1Q92902 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC6.17□□□□□ -1.42
HPS1Q92902 RNU6-1266P-201ENST00000362794 105 ntBASIC6.17□□□□□ -1.42
HPS1Q92902 SNORA23-201ENST00000365128 182 ntBASIC6.17□□□□□ -1.42
HPS1Q92902 RN7SKP186-201ENST00000365371 303 ntBASIC6.17□□□□□ -1.42
HPS1Q92902 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HPS1Q92902 Y_RNA.471-201ENST00000384312 102 ntBASIC6.17□□□□□ -1.42
HPS1Q92902 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
HPS1Q92902 RNU6-1055P-201ENST00000391085 107 ntBASIC6.17□□□□□ -1.42
HPS1Q92902 AL593856.1-201ENST00000419949 805 ntBASIC6.17□□□□□ -1.42
HPS1Q92902 AL034379.1-201ENST00000423216 253 ntBASIC6.17□□□□□ -1.42
HPS1Q92902 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.17□□□□□ -1.42
HPS1Q92902 FAR2P4-202ENST00000425399 584 ntBASIC6.17□□□□□ -1.42
HPS1Q92902 AC130360.1-201ENST00000425489 1117 ntBASIC6.17□□□□□ -1.42
HPS1Q92902 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.17□□□□□ -1.42
HPS1Q92902 CALM2P2-201ENST00000428512 440 ntBASIC6.17□□□□□ -1.42
HPS1Q92902 AL445305.1-201ENST00000432577 575 ntBASIC6.17□□□□□ -1.42
HPS1Q92902 AL645568.3-201ENST00000433683 316 ntBASIC6.17□□□□□ -1.42
HPS1Q92902 AL356133.1-201ENST00000444762 372 ntBASIC6.17□□□□□ -1.42
HPS1Q92902 REG1CP-206ENST00000447469 496 ntBASIC6.17□□□□□ -1.42
HPS1Q92902 AL031274.1-201ENST00000450334 232 ntBASIC6.17□□□□□ -1.42
HPS1Q92902 AL034399.1-201ENST00000451535 380 ntBASIC6.17□□□□□ -1.42
HPS1Q92902 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC6.17□□□□□ -1.42
HPS1Q92902 AC117503.1-201ENST00000472241 394 ntBASIC6.17□□□□□ -1.42
HPS1Q92902 RPS23P5-201ENST00000495419 428 ntBASIC6.17□□□□□ -1.42
HPS1Q92902 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC6.17□□□□□ -1.42
HPS1Q92902 AC100784.1-201ENST00000522790 310 ntBASIC6.17□□□□□ -1.42
HPS1Q92902 AC130366.1-201ENST00000526505 1192 ntBASIC6.17□□□□□ -1.42
HPS1Q92902 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.17□□□□□ -1.42
HPS1Q92902 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC6.17□□□□□ -1.42
HPS1Q92902 MRPS36P4-201ENST00000534436 298 ntBASIC6.17□□□□□ -1.42
HPS1Q92902 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC6.17□□□□□ -1.42
HPS1Q92902 AL356274.1-201ENST00000617064 410 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms