Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC004777.1-201ENST00000624317 287 ntBASIC4.53□□□□□ -1.68
HMGB4Q8WW32 FAM157B-203ENST00000639350 358 ntBASIC4.53□□□□□ -1.68
HMGB4Q8WW32 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HMGB4Q8WW32 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
HMGB4Q8WW32 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.53□□□□□ -1.68
HMGB4Q8WW32 AL079343.1-201ENST00000572358 1771 ntBASIC4.53□□□□□ -1.69
HMGB4Q8WW32 AC125257.1-201ENST00000560400 2930 ntBASIC4.52□□□□□ -1.69
HMGB4Q8WW32 AL513185.3-201ENST00000433335 1300 ntBASIC4.52□□□□□ -1.69
HMGB4Q8WW32 AC011477.1-204ENST00000623416 1325 ntBASIC4.52□□□□□ -1.69
HMGB4Q8WW32 MAPK10-304ENST00000641341 3984 ntBASIC4.52□□□□□ -1.69
HMGB4Q8WW32 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMGB4Q8WW32 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMGB4Q8WW32 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMGB4Q8WW32 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
HMGB4Q8WW32 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HMGB4Q8WW32 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
HMGB4Q8WW32 RNU1-64P-201ENST00000365443 163 ntBASIC4.52□□□□□ -1.69
HMGB4Q8WW32 AL080315.1-201ENST00000406055 466 ntBASIC4.52□□□□□ -1.69
HMGB4Q8WW32 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.52□□□□□ -1.69
HMGB4Q8WW32 RPS15AP40-201ENST00000419621 391 ntBASIC4.52□□□□□ -1.69
HMGB4Q8WW32 RPL23AP38-201ENST00000423801 469 ntBASIC4.52□□□□□ -1.69
HMGB4Q8WW32 EIF4HP2-201ENST00000424380 563 ntBASIC4.52□□□□□ -1.69
HMGB4Q8WW32 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.52□□□□□ -1.69
HMGB4Q8WW32 ISCA1P2-201ENST00000438679 421 ntBASIC4.52□□□□□ -1.69
HMGB4Q8WW32 RPL23AP43-201ENST00000446445 471 ntBASIC4.52□□□□□ -1.69
HMGB4Q8WW32 RPL23AP35-201ENST00000451906 501 ntBASIC4.52□□□□□ -1.69
HMGB4Q8WW32 RPS27AP8-201ENST00000452665 445 ntBASIC4.52□□□□□ -1.69
HMGB4Q8WW32 AC087385.1-201ENST00000475062 312 ntBASIC4.52□□□□□ -1.69
HMGB4Q8WW32 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.52□□□□□ -1.69
HMGB4Q8WW32 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.52□□□□□ -1.69
HMGB4Q8WW32 AC006499.2-201ENST00000513470 337 ntBASIC4.52□□□□□ -1.69
HMGB4Q8WW32 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.52□□□□□ -1.69
HMGB4Q8WW32 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HMGB4Q8WW32 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.52□□□□□ -1.69
HMGB4Q8WW32 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.52□□□□□ -1.69
HMGB4Q8WW32 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.52□□□□□ -1.69
HMGB4Q8WW32 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.52□□□□□ -1.69
HMGB4Q8WW32 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.52□□□□□ -1.69
HMGB4Q8WW32 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.52□□□□□ -1.69
HMGB4Q8WW32 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.52□□□□□ -1.69
HMGB4Q8WW32 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.52□□□□□ -1.69
HMGB4Q8WW32 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.52□□□□□ -1.69
HMGB4Q8WW32 AC020914.6-201ENST00000594327 272 ntBASIC4.52□□□□□ -1.69
HMGB4Q8WW32 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.52□□□□□ -1.69
HMGB4Q8WW32 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.52□□□□□ -1.69
HMGB4Q8WW32 AC243773.3-201ENST00000613270 256 ntBASIC4.52□□□□□ -1.69
HMGB4Q8WW32 AL031667.3-201ENST00000620124 655 ntBASIC4.52□□□□□ -1.69
HMGB4Q8WW32 AL023881.1-201ENST00000621088 301 ntBASIC4.52□□□□□ -1.69
HMGB4Q8WW32 AF246928.1-201ENST00000623768 87 ntBASIC4.52□□□□□ -1.69
HMGB4Q8WW32 MIR3653-201ENST00000625572 110 ntBASIC4.52□□□□□ -1.69
HMGB4Q8WW32 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.52□□□□□ -1.69
HMGB4Q8WW32 MTCO1P14-201ENST00000441695 1559 ntBASIC4.52□□□□□ -1.69
HMGB4Q8WW32 AC104118.1-201ENST00000607625 1589 ntBASIC4.52□□□□□ -1.69
HMGB4Q8WW32 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HMGB4Q8WW32 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
HMGB4Q8WW32 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.51□□□□□ -1.69
HMGB4Q8WW32 MAPK10-349ENST00000641767 3661 ntBASIC4.51□□□□□ -1.69
HMGB4Q8WW32 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.51□□□□□ -1.69
HMGB4Q8WW32 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.51□□□□□ -1.69
HMGB4Q8WW32 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
HMGB4Q8WW32 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HMGB4Q8WW32 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
HMGB4Q8WW32 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HMGB4Q8WW32 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
HMGB4Q8WW32 AC008033.1-201ENST00000216407 1162 ntBASIC4.51□□□□□ -1.69
HMGB4Q8WW32 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HMGB4Q8WW32 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HMGB4Q8WW32 AC008549.2-201ENST00000333482 706 ntBASIC4.51□□□□□ -1.69
HMGB4Q8WW32 MIR383-201ENST00000362257 73 ntBASIC4.51□□□□□ -1.69
HMGB4Q8WW32 SNORA51.6-201ENST00000384151 125 ntBASIC4.51□□□□□ -1.69
HMGB4Q8WW32 SNORA48.7-201ENST00000391302 135 ntBASIC4.51□□□□□ -1.69
HMGB4Q8WW32 SSXP10-201ENST00000402595 565 ntBASIC4.51□□□□□ -1.69
HMGB4Q8WW32 BTBD10P2-201ENST00000404779 676 ntBASIC4.51□□□□□ -1.69
HMGB4Q8WW32 RN7SKP247-201ENST00000411094 308 ntBASIC4.51□□□□□ -1.69
HMGB4Q8WW32 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.51□□□□□ -1.69
HMGB4Q8WW32 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC4.51□□□□□ -1.69
HMGB4Q8WW32 AC073136.2-201ENST00000417282 849 ntBASIC4.51□□□□□ -1.69
HMGB4Q8WW32 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.51□□□□□ -1.69
HMGB4Q8WW32 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.51□□□□□ -1.69
HMGB4Q8WW32 AC004448.2-201ENST00000422360 586 ntBASIC4.51□□□□□ -1.69
HMGB4Q8WW32 AL953862.1-201ENST00000423016 168 ntBASIC4.51□□□□□ -1.69
HMGB4Q8WW32 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HMGB4Q8WW32 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.51□□□□□ -1.69
HMGB4Q8WW32 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.51□□□□□ -1.69
HMGB4Q8WW32 ELOCP8-201ENST00000439309 332 ntBASIC4.51□□□□□ -1.69
HMGB4Q8WW32 ELOCP15-201ENST00000442090 332 ntBASIC4.51□□□□□ -1.69
HMGB4Q8WW32 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.51□□□□□ -1.69
HMGB4Q8WW32 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.51□□□□□ -1.69
HMGB4Q8WW32 IFNWP4-201ENST00000453148 294 ntBASIC4.51□□□□□ -1.69
HMGB4Q8WW32 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.51□□□□□ -1.69
HMGB4Q8WW32 RPS27AP17-201ENST00000463344 455 ntBASIC4.51□□□□□ -1.69
HMGB4Q8WW32 AC108475.1-201ENST00000507880 950 ntBASIC4.51□□□□□ -1.69
HMGB4Q8WW32 SLC25A15P5-201ENST00000508033 253 ntBASIC4.51□□□□□ -1.69
HMGB4Q8WW32 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
HMGB4Q8WW32 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.51□□□□□ -1.69
HMGB4Q8WW32 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.51□□□□□ -1.69
HMGB4Q8WW32 RNA5SP249-201ENST00000516127 99 ntBASIC4.51□□□□□ -1.69
HMGB4Q8WW32 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.51□□□□□ -1.69
HMGB4Q8WW32 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.51□□□□□ -1.69
HMGB4Q8WW32 MTCO1P49-201ENST00000523429 802 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms