Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AL450489.1-201ENST00000612071 468 ntBASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 U4.6-201ENST00000621618 127 ntBASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 AC093908.1-201ENST00000623125 8092 ntBASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 AL079305.1-201ENST00000623159 3008 ntBASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 NSRP1P1-201ENST00000444067 1693 ntBASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLHC1Q8NHS4 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLHC1Q8NHS4 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLHC1Q8NHS4 RNU6-819P-201ENST00000364116 107 ntBASIC3.38□□□□□ -1.87
CLHC1Q8NHS4 AC007066.1-201ENST00000392902 381 ntBASIC3.38□□□□□ -1.87
CLHC1Q8NHS4 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.38□□□□□ -1.87
CLHC1Q8NHS4 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.38□□□□□ -1.87
CLHC1Q8NHS4 RN7SKP263-201ENST00000411194 309 ntBASIC3.38□□□□□ -1.87
CLHC1Q8NHS4 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.38□□□□□ -1.87
CLHC1Q8NHS4 RPS15AP6-201ENST00000420703 385 ntBASIC3.38□□□□□ -1.87
CLHC1Q8NHS4 RPL37P1-201ENST00000432310 284 ntBASIC3.38□□□□□ -1.87
CLHC1Q8NHS4 RPL6P5-201ENST00000445678 828 ntBASIC3.38□□□□□ -1.87
CLHC1Q8NHS4 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.38□□□□□ -1.87
CLHC1Q8NHS4 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC3.38□□□□□ -1.87
CLHC1Q8NHS4 AP002884.2-201ENST00000471647 395 ntBASIC3.38□□□□□ -1.87
CLHC1Q8NHS4 AC007688.1-201ENST00000475592 759 ntBASIC3.38□□□□□ -1.87
CLHC1Q8NHS4 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLHC1Q8NHS4 FABP5P6-201ENST00000510588 409 ntBASIC3.38□□□□□ -1.87
CLHC1Q8NHS4 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.38□□□□□ -1.87
CLHC1Q8NHS4 NPM1P41-201ENST00000512920 831 ntBASIC3.38□□□□□ -1.87
CLHC1Q8NHS4 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.38□□□□□ -1.87
CLHC1Q8NHS4 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.38□□□□□ -1.87
CLHC1Q8NHS4 RNU2-27P-201ENST00000516185 142 ntBASIC3.38□□□□□ -1.87
CLHC1Q8NHS4 RNU6-579P-201ENST00000516879 102 ntBASIC3.38□□□□□ -1.87
CLHC1Q8NHS4 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.38□□□□□ -1.87
CLHC1Q8NHS4 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.38□□□□□ -1.87
CLHC1Q8NHS4 AC026333.2-201ENST00000542164 106 ntBASIC3.38□□□□□ -1.87
CLHC1Q8NHS4 DUXAP6-201ENST00000553858 601 ntBASIC3.38□□□□□ -1.87
CLHC1Q8NHS4 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.38□□□□□ -1.87
CLHC1Q8NHS4 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.38□□□□□ -1.87
CLHC1Q8NHS4 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CLHC1Q8NHS4 AL109653.1-201ENST00000603091 248 ntBASIC3.38□□□□□ -1.87
CLHC1Q8NHS4 YWHAQP7-201ENST00000603536 658 ntBASIC3.38□□□□□ -1.87
CLHC1Q8NHS4 IGHV3-29-201ENST00000604817 344 ntBASIC3.38□□□□□ -1.87
CLHC1Q8NHS4 AF117829.1-206ENST00000621883 3802 ntBASIC3.38□□□□□ -1.87
CLHC1Q8NHS4 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CLHC1Q8NHS4 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CLHC1Q8NHS4 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLHC1Q8NHS4 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.38□□□□□ -1.87
CLHC1Q8NHS4 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 AC110774.1-201ENST00000623567 2018 ntBASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 AC004925.1-201ENST00000624256 2706 ntBASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 FRG1CP-201ENST00000358464 769 ntBASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 SNORD9-201ENST00000362566 104 ntBASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 RNA5SP51-201ENST00000364750 119 ntBASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 HMGB3P18-201ENST00000406327 590 ntBASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 RN7SKP53-201ENST00000411337 315 ntBASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 AC017079.2-201ENST00000416102 485 ntBASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 AC068533.1-201ENST00000418542 415 ntBASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 MTCO3P4-201ENST00000419236 787 ntBASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 RPL31P12-201ENST00000422587 358 ntBASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 AL513174.1-201ENST00000423182 629 ntBASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 Z99714.1-201ENST00000450463 807 ntBASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 HMGB1P5-202ENST00000451497 985 ntBASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 NECAP1P2-201ENST00000455668 727 ntBASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 TRBV8-2-201ENST00000475637 270 ntBASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 RPL23AP44-201ENST00000482216 473 ntBASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 PHBP14-201ENST00000512887 367 ntBASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 AC104997.1-201ENST00000519761 717 ntBASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 MTCO1P49-201ENST00000523429 802 ntBASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 AC004923.2-201ENST00000529649 369 ntBASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 AL845331.3-202ENST00000562856 261 ntBASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 MIR4425-201ENST00000580572 84 ntBASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 AC011816.2-201ENST00000607089 556 ntBASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 AC099676.1-201ENST00000608886 657 ntBASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 AC068724.3-201ENST00000625906 87 ntBASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 AC002546.1-201ENST00000588041 2504 ntBASIC3.37□□□□□ -1.87
CLHC1Q8NHS4 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.36□□□□□ -1.87
CLHC1Q8NHS4 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CLHC1Q8NHS4 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms