Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.41□□□□□ -1.86
BEST4Q8NFU0 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.41□□□□□ -1.86
BEST4Q8NFU0 GTF2IP8-201ENST00000560687 584 ntBASIC3.41□□□□□ -1.86
BEST4Q8NFU0 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.41□□□□□ -1.86
BEST4Q8NFU0 MIR3912-201ENST00000577566 105 ntBASIC3.41□□□□□ -1.86
BEST4Q8NFU0 MIR4330-201ENST00000579077 105 ntBASIC3.41□□□□□ -1.86
BEST4Q8NFU0 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
BEST4Q8NFU0 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.41□□□□□ -1.86
BEST4Q8NFU0 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
BEST4Q8NFU0 GAS5-AS1-201ENST00000602767 694 ntBASIC3.41□□□□□ -1.86
BEST4Q8NFU0 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.41□□□□□ -1.86
BEST4Q8NFU0 AC083899.3-201ENST00000603413 594 ntBASIC3.41□□□□□ -1.86
BEST4Q8NFU0 AL035411.2-201ENST00000604022 421 ntBASIC3.41□□□□□ -1.86
BEST4Q8NFU0 AC114878.2-201ENST00000604863 1251 ntBASIC3.41□□□□□ -1.86
BEST4Q8NFU0 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.41□□□□□ -1.86
BEST4Q8NFU0 AC090948.1-201ENST00000607464 549 ntBASIC3.41□□□□□ -1.86
BEST4Q8NFU0 AP000894.4-201ENST00000610185 483 ntBASIC3.41□□□□□ -1.86
BEST4Q8NFU0 SDR42E1P1-201ENST00000611327 477 ntBASIC3.41□□□□□ -1.86
BEST4Q8NFU0 AC018445.2-201ENST00000622987 260 ntBASIC3.41□□□□□ -1.86
BEST4Q8NFU0 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
BEST4Q8NFU0 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.41□□□□□ -1.86
BEST4Q8NFU0 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
BEST4Q8NFU0 RARSP1-201ENST00000542842 1418 ntBASIC3.41□□□□□ -1.86
BEST4Q8NFU0 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
BEST4Q8NFU0 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
BEST4Q8NFU0 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
BEST4Q8NFU0 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
BEST4Q8NFU0 BRAFP1-201ENST00000445336 2703 ntBASIC3.41□□□□□ -1.86
BEST4Q8NFU0 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
BEST4Q8NFU0 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
BEST4Q8NFU0 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.4□□□□□ -1.86
BEST4Q8NFU0 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.86
BEST4Q8NFU0 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
BEST4Q8NFU0 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.4□□□□□ -1.86
BEST4Q8NFU0 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
BEST4Q8NFU0 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
BEST4Q8NFU0 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
BEST4Q8NFU0 RNU6-921P-201ENST00000384361 107 ntBASIC3.4□□□□□ -1.87
BEST4Q8NFU0 RNU6-1300P-201ENST00000391046 108 ntBASIC3.4□□□□□ -1.87
BEST4Q8NFU0 RPS3AP25-201ENST00000411660 793 ntBASIC3.4□□□□□ -1.87
BEST4Q8NFU0 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.4□□□□□ -1.87
BEST4Q8NFU0 AC092634.6-201ENST00000418558 192 ntBASIC3.4□□□□□ -1.87
BEST4Q8NFU0 RPS12P23-201ENST00000419579 400 ntBASIC3.4□□□□□ -1.87
BEST4Q8NFU0 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
BEST4Q8NFU0 MTCO3P1-205ENST00000422088 832 ntBASIC3.4□□□□□ -1.87
BEST4Q8NFU0 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.4□□□□□ -1.87
BEST4Q8NFU0 OR51AB1P-201ENST00000429046 620 ntBASIC3.4□□□□□ -1.87
BEST4Q8NFU0 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.4□□□□□ -1.87
BEST4Q8NFU0 SKP1P1-201ENST00000438081 489 ntBASIC3.4□□□□□ -1.87
BEST4Q8NFU0 RPL12P3-201ENST00000440080 396 ntBASIC3.4□□□□□ -1.87
BEST4Q8NFU0 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.4□□□□□ -1.87
BEST4Q8NFU0 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.4□□□□□ -1.87
BEST4Q8NFU0 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.4□□□□□ -1.87
BEST4Q8NFU0 DNAJC19P1-201ENST00000455312 319 ntBASIC3.4□□□□□ -1.87
BEST4Q8NFU0 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
BEST4Q8NFU0 RNA5SP246-201ENST00000458909 119 ntBASIC3.4□□□□□ -1.87
BEST4Q8NFU0 RNU7-170P-201ENST00000459303 61 ntBASIC3.4□□□□□ -1.87
BEST4Q8NFU0 RPL23AP14-201ENST00000468281 468 ntBASIC3.4□□□□□ -1.87
BEST4Q8NFU0 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.4□□□□□ -1.87
BEST4Q8NFU0 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.4□□□□□ -1.87
BEST4Q8NFU0 AC087879.1-201ENST00000474343 374 ntBASIC3.4□□□□□ -1.87
BEST4Q8NFU0 RN7SL691P-201ENST00000494487 301 ntBASIC3.4□□□□□ -1.87
BEST4Q8NFU0 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.4□□□□□ -1.87
BEST4Q8NFU0 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.4□□□□□ -1.87
BEST4Q8NFU0 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.4□□□□□ -1.87
BEST4Q8NFU0 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
BEST4Q8NFU0 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
BEST4Q8NFU0 RNU6-488P-201ENST00000515918 99 ntBASIC3.4□□□□□ -1.87
BEST4Q8NFU0 RN7SKP265-201ENST00000516448 223 ntBASIC3.4□□□□□ -1.87
BEST4Q8NFU0 RNA5SP135-201ENST00000517019 125 ntBASIC3.4□□□□□ -1.87
BEST4Q8NFU0 AP001317.1-201ENST00000531194 960 ntBASIC3.4□□□□□ -1.87
BEST4Q8NFU0 AL121576.1-201ENST00000556055 276 ntBASIC3.4□□□□□ -1.87
BEST4Q8NFU0 MIR4436B2-201ENST00000581415 91 ntBASIC3.4□□□□□ -1.87
BEST4Q8NFU0 MIR4436B1-201ENST00000583272 91 ntBASIC3.4□□□□□ -1.87
BEST4Q8NFU0 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC3.4□□□□□ -1.87
BEST4Q8NFU0 AC022146.1-201ENST00000595307 847 ntBASIC3.4□□□□□ -1.87
BEST4Q8NFU0 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.4□□□□□ -1.87
BEST4Q8NFU0 FAM25E-202ENST00000608562 189 ntBASIC3.4□□□□□ -1.87
BEST4Q8NFU0 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.4□□□□□ -1.87
BEST4Q8NFU0 AC063944.3-201ENST00000609969 533 ntBASIC3.4□□□□□ -1.87
BEST4Q8NFU0 AL592295.2-201ENST00000612578 206 ntBASIC3.4□□□□□ -1.87
BEST4Q8NFU0 AC009159.2-201ENST00000617603 606 ntBASIC3.4□□□□□ -1.87
BEST4Q8NFU0 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
BEST4Q8NFU0 MIR6864-201ENST00000617935 70 ntBASIC3.4□□□□□ -1.87
BEST4Q8NFU0 MIR6729-201ENST00000618194 65 ntBASIC3.4□□□□□ -1.87
BEST4Q8NFU0 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.4□□□□□ -1.87
BEST4Q8NFU0 AC116667.1-201ENST00000604855 2072 ntBASIC3.4□□□□□ -1.87
BEST4Q8NFU0 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
BEST4Q8NFU0 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
BEST4Q8NFU0 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
BEST4Q8NFU0 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
BEST4Q8NFU0 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.39□□□□□ -1.87
BEST4Q8NFU0 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
BEST4Q8NFU0 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
BEST4Q8NFU0 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
BEST4Q8NFU0 RNU5D-1-201ENST00000363299 116 ntBASIC3.39□□□□□ -1.87
BEST4Q8NFU0 RNU6-1243P-201ENST00000364028 107 ntBASIC3.39□□□□□ -1.87
BEST4Q8NFU0 RNU6-115P-201ENST00000364310 107 ntBASIC3.39□□□□□ -1.87
BEST4Q8NFU0 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.39□□□□□ -1.87
BEST4Q8NFU0 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms