Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 SULT1C2P2-201ENST00000562517 294 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AC034105.3-201ENST00000565294 442 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AL034351.1-201ENST00000605288 668 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AL591424.2-201ENST00000617023 128 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AC018692.3-201ENST00000623929 123 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 ZNF90P1-201ENST00000480493 1951 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 MIR22-201ENST00000362190 85 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 OR13C3-201ENST00000374781 1108 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 HMGN2P8-201ENST00000391458 268 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AL159169.1-201ENST00000421119 127 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 RPS20P1-201ENST00000434853 354 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AL121594.4-201ENST00000556211 1196 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AC084036.1-201ENST00000609190 508 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AC132825.8-201ENST00000640783 297 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AC004925.1-201ENST00000624256 2706 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AC004972.1-201ENST00000623934 2209 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 MIR7-2-201ENST00000384970 110 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AC098824.1-201ENST00000453565 980 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AC108022.1-201ENST00000493466 478 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AC019227.1-201ENST00000526902 510 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 CYP2C60P-201ENST00000566088 139 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AC006971.1-201ENST00000407916 4486 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 U3.19-201ENST00000390893 196 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 USP12PY-201ENST00000427677 1064 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 BX890604.2-201ENST00000427883 474 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AC021146.1-201ENST00000511202 716 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AL109741.3-201ENST00000561748 592 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AC073657.2-201ENST00000605661 303 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 ZNF807-201ENST00000328088 1707 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 WWP1P1-201ENST00000466609 2769 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 VTA1P1-201ENST00000414044 866 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 TRIM60P18-201ENST00000441518 828 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 NANOGNBP1-201ENST00000448444 480 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AL513124.1-201ENST00000450410 614 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 RN7SL442P-201ENST00000473804 320 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AC087385.1-201ENST00000475062 312 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AP006245.1-201ENST00000522549 120 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AC092851.1-201ENST00000535964 478 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 LYZ-203ENST00000549690 669 ntTSL 2 BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AL162713.1-201ENST00000604480 262 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AP003499.2-201ENST00000624100 483 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 ETF1P3-201ENST00000430422 1160 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AC245517.2-201ENST00000442890 346 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 VN1R48P-201ENST00000448149 1036 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AC008507.1-201ENST00000587506 734 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AL390838.2-201ENST00000602394 274 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AC046143.2-201ENST00000609789 160 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AC010149.2-201ENST00000637608 315 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 SNORA18.3-201ENST00000384122 132 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 SEPT7P2-202ENST00000398921 823 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 AL353692.2-201ENST00000407054 335 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 NPM1P48-201ENST00000436002 853 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms