Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 RNU1-108P-201ENST00000362556 161 ntBASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 RPS15AP40-201ENST00000419621 391 ntBASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 RPL7P44-201ENST00000424827 742 ntBASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 RPL21P91-201ENST00000429231 479 ntBASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 NRBF2P3-201ENST00000432731 865 ntBASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 MTND3P1-201ENST00000441336 220 ntBASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 RPL5P23-201ENST00000496040 868 ntBASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 MTND4LP31-201ENST00000514859 294 ntBASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 SNORA3.4-201ENST00000515969 96 ntBASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 RNU6-1225P-201ENST00000516336 65 ntBASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 RNA5SP309-201ENST00000516670 106 ntBASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 RFPL1S-203ENST00000539579 330 ntBASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 OR6C73P-201ENST00000546432 358 ntBASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 AC022726.1-201ENST00000587475 207 ntBASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 AC022146.1-201ENST00000595307 847 ntBASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 BNIP3P26-201ENST00000600827 554 ntBASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 AL353778.1-201ENST00000603149 408 ntBASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 AL451074.6-201ENST00000608512 729 ntBASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 AL445567.2-201ENST00000618935 498 ntBASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 AP000484.1-201ENST00000620067 1252 ntBASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 AC098679.5-201ENST00000624394 571 ntBASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 AC068620.4-201ENST00000636730 1182 ntBASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 MARK2P15-201ENST00000432204 2186 ntBASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 AC010928.1-201ENST00000592477 1447 ntBASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 MTND5P3-201ENST00000438536 1800 ntBASIC3.77□□□□□ -1.81
PDLIM3Q53GG5 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
PDLIM3Q53GG5 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
PDLIM3Q53GG5 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
PDLIM3Q53GG5 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PDLIM3Q53GG5 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PDLIM3Q53GG5 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
PDLIM3Q53GG5 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PDLIM3Q53GG5 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PDLIM3Q53GG5 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
PDLIM3Q53GG5 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.76□□□□□ -1.81
PDLIM3Q53GG5 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.76□□□□□ -1.81
PDLIM3Q53GG5 AC011978.2-201ENST00000569835 2054 ntBASIC3.76□□□□□ -1.81
PDLIM3Q53GG5 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PDLIM3Q53GG5 FAM133CP-201ENST00000332869 704 ntBASIC3.76□□□□□ -1.81
PDLIM3Q53GG5 RNU6-560P-201ENST00000364007 108 ntBASIC3.76□□□□□ -1.81
PDLIM3Q53GG5 RNU6-657P-201ENST00000383904 107 ntBASIC3.76□□□□□ -1.81
PDLIM3Q53GG5 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
PDLIM3Q53GG5 U3.30-201ENST00000391308 210 ntBASIC3.76□□□□□ -1.81
PDLIM3Q53GG5 MTND4P13-201ENST00000402078 1023 ntBASIC3.76□□□□□ -1.81
PDLIM3Q53GG5 AL049697.2-201ENST00000403708 294 ntBASIC3.76□□□□□ -1.81
PDLIM3Q53GG5 ZNF603P-201ENST00000405613 487 ntBASIC3.76□□□□□ -1.81
PDLIM3Q53GG5 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PDLIM3Q53GG5 RAD23BP1-201ENST00000421404 1227 ntBASIC3.76□□□□□ -1.81
PDLIM3Q53GG5 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PDLIM3Q53GG5 EIF4EP1-201ENST00000422311 642 ntBASIC3.76□□□□□ -1.81
PDLIM3Q53GG5 AC233981.1-201ENST00000423224 461 ntBASIC3.76□□□□□ -1.81
PDLIM3Q53GG5 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.76□□□□□ -1.81
PDLIM3Q53GG5 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.76□□□□□ -1.81
PDLIM3Q53GG5 PSMA2P3-201ENST00000429685 675 ntBASIC3.76□□□□□ -1.81
PDLIM3Q53GG5 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PDLIM3Q53GG5 AC005154.2-201ENST00000438110 379 ntBASIC3.76□□□□□ -1.81
PDLIM3Q53GG5 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.76□□□□□ -1.81
PDLIM3Q53GG5 CBX1P1-201ENST00000440184 427 ntBASIC3.76□□□□□ -1.81
PDLIM3Q53GG5 PRSS3P4-201ENST00000453323 162 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms