Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RHBDL3P58872 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RHBDL3P58872 RNA5SP130-201ENST00000364431 114 ntBASIC5.1□□□□□ -1.59
RHBDL3P58872 RNA5SP167-201ENST00000365461 116 ntBASIC5.1□□□□□ -1.59
RHBDL3P58872 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
RHBDL3P58872 RN7SKP182-201ENST00000410772 298 ntBASIC5.1□□□□□ -1.59
RHBDL3P58872 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC5.1□□□□□ -1.59
RHBDL3P58872 OR2X1P-201ENST00000421144 687 ntBASIC5.1□□□□□ -1.59
RHBDL3P58872 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RHBDL3P58872 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC5.1□□□□□ -1.59
RHBDL3P58872 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.1□□□□□ -1.59
RHBDL3P58872 AL132765.1-201ENST00000434165 553 ntBASIC5.1□□□□□ -1.59
RHBDL3P58872 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC5.1□□□□□ -1.59
RHBDL3P58872 AL031584.1-201ENST00000447169 754 ntBASIC5.1□□□□□ -1.59
RHBDL3P58872 SNRPGP5-201ENST00000456003 220 ntBASIC5.1□□□□□ -1.59
RHBDL3P58872 snoU13.3-201ENST00000459441 104 ntBASIC5.1□□□□□ -1.59
RHBDL3P58872 MTND1P16-201ENST00000465177 898 ntBASIC5.1□□□□□ -1.59
RHBDL3P58872 AC090013.1-201ENST00000485147 480 ntBASIC5.1□□□□□ -1.59
RHBDL3P58872 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.1□□□□□ -1.59
RHBDL3P58872 OR4G11P-201ENST00000492842 939 ntBASIC5.1□□□□□ -1.59
RHBDL3P58872 NUP58P1-201ENST00000502546 1738 ntBASIC5.1□□□□□ -1.59
RHBDL3P58872 AC108078.3-201ENST00000502633 489 ntBASIC5.1□□□□□ -1.59
RHBDL3P58872 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.1□□□□□ -1.59
RHBDL3P58872 HMGB1P28-201ENST00000507778 552 ntBASIC5.1□□□□□ -1.59
RHBDL3P58872 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RHBDL3P58872 AC079395.1-201ENST00000510981 262 ntBASIC5.1□□□□□ -1.59
RHBDL3P58872 AC026412.2-201ENST00000512270 1075 ntBASIC5.1□□□□□ -1.59
RHBDL3P58872 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.1□□□□□ -1.59
RHBDL3P58872 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC5.1□□□□□ -1.59
RHBDL3P58872 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.1□□□□□ -1.59
RHBDL3P58872 AP001372.4-201ENST00000524889 472 ntBASIC5.1□□□□□ -1.59
RHBDL3P58872 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.1□□□□□ -1.59
RHBDL3P58872 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC5.1□□□□□ -1.59
RHBDL3P58872 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC5.1□□□□□ -1.59
RHBDL3P58872 MTND1P24-201ENST00000552175 861 ntBASIC5.1□□□□□ -1.59
RHBDL3P58872 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.1□□□□□ -1.59
RHBDL3P58872 NBEAP1-201ENST00000554452 979 ntBASIC5.1□□□□□ -1.59
RHBDL3P58872 AC069304.2-201ENST00000605154 435 ntBASIC5.1□□□□□ -1.59
RHBDL3P58872 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC5.1□□□□□ -1.59
RHBDL3P58872 AC006927.4-201ENST00000639187 543 ntBASIC5.1□□□□□ -1.59
RHBDL3P58872 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RHBDL3P58872 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RHBDL3P58872 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RHBDL3P58872 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RHBDL3P58872 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RHBDL3P58872 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
RHBDL3P58872 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.09□□□□□ -1.59
RHBDL3P58872 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.09□□□□□ -1.59
RHBDL3P58872 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC5.09□□□□□ -1.59
RHBDL3P58872 AC095050.2-201ENST00000510748 1458 ntBASIC5.09□□□□□ -1.59
RHBDL3P58872 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RHBDL3P58872 RNU6-621P-201ENST00000364752 109 ntBASIC5.09□□□□□ -1.59
RHBDL3P58872 Y_RNA.311-201ENST00000365068 96 ntBASIC5.09□□□□□ -1.59
RHBDL3P58872 RNA5SP283-201ENST00000365604 119 ntBASIC5.09□□□□□ -1.59
RHBDL3P58872 SNORD116.1-201ENST00000365628 92 ntBASIC5.09□□□□□ -1.59
RHBDL3P58872 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
RHBDL3P58872 TIMM9P2-201ENST00000419324 266 ntBASIC5.09□□□□□ -1.59
RHBDL3P58872 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.09□□□□□ -1.59
RHBDL3P58872 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RHBDL3P58872 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.09□□□□□ -1.59
RHBDL3P58872 AC127537.2-201ENST00000439258 465 ntBASIC5.09□□□□□ -1.59
RHBDL3P58872 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.09□□□□□ -1.59
RHBDL3P58872 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RHBDL3P58872 RPL39P6-201ENST00000448289 150 ntBASIC5.09□□□□□ -1.59
RHBDL3P58872 RPL21P134-201ENST00000453468 483 ntBASIC5.09□□□□□ -1.59
RHBDL3P58872 RPL5P32-201ENST00000454085 879 ntBASIC5.09□□□□□ -1.59
RHBDL3P58872 AL133477.1-201ENST00000457472 514 ntBASIC5.09□□□□□ -1.59
RHBDL3P58872 RPS20P24-201ENST00000457473 361 ntBASIC5.09□□□□□ -1.59
RHBDL3P58872 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.09□□□□□ -1.59
RHBDL3P58872 MTCO3P35-201ENST00000485582 781 ntBASIC5.09□□□□□ -1.59
RHBDL3P58872 AC114981.1-201ENST00000503897 678 ntBASIC5.09□□□□□ -1.59
RHBDL3P58872 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.09□□□□□ -1.59
RHBDL3P58872 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.09□□□□□ -1.59
RHBDL3P58872 AC023050.2-201ENST00000544968 387 ntBASIC5.09□□□□□ -1.59
RHBDL3P58872 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.09□□□□□ -1.59
RHBDL3P58872 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC5.09□□□□□ -1.59
RHBDL3P58872 AGGF1P5-201ENST00000567900 919 ntBASIC5.09□□□□□ -1.59
RHBDL3P58872 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.09□□□□□ -1.59
RHBDL3P58872 DUXAP3-201ENST00000603616 594 ntBASIC5.09□□□□□ -1.59
RHBDL3P58872 AC080013.4-201ENST00000607624 649 ntBASIC5.09□□□□□ -1.59
RHBDL3P58872 AC005086.4-201ENST00000623065 213 ntBASIC5.09□□□□□ -1.59
RHBDL3P58872 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.09□□□□□ -1.59
RHBDL3P58872 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.09□□□□□ -1.59
RHBDL3P58872 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC5.09□□□□□ -1.59
RHBDL3P58872 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.09□□□□□ -1.59
RHBDL3P58872 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.09□□□□□ -1.59
RHBDL3P58872 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.09□□□□□ -1.6
RHBDL3P58872 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.09□□□□□ -1.6
RHBDL3P58872 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RHBDL3P58872 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
RHBDL3P58872 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
RHBDL3P58872 MTCO1P23-201ENST00000415223 1526 ntBASIC5.08□□□□□ -1.6
RHBDL3P58872 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RHBDL3P58872 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RHBDL3P58872 AC005539.1-201ENST00000443768 1479 ntBASIC5.08□□□□□ -1.6
RHBDL3P58872 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.08□□□□□ -1.6
RHBDL3P58872 SMG1P4-204ENST00000523028 4131 ntBASIC5.08□□□□□ -1.6
RHBDL3P58872 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RHBDL3P58872 SNRPEP3-201ENST00000338402 276 ntBASIC5.08□□□□□ -1.6
RHBDL3P58872 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 171.5 ms